FANCE

General Information

Gene Name : FANCE
Gene ID : ENSG00000112039.4
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FANCE)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FANCE	ENSG00000112039.4	4.58	5.51	5.04	ENCSR000AEF
HepG2	FANCE	ENSG00000112039.4	6.04	6.29	6.17	ENCSR985KAT
K562	FANCE	ENSG00000112039.4	12.51	12.29	12.40	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FANCE is not avaliable on ENCORE database.

Proteins bound to RNA

FANCE RNA is bound by 5 proteins.

CanvasJS.com

eCLIP assay for FANCE is not avaliable on ENCORE database.

5 proteins are bound to FANCE RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	35434770	35434844	+	3'-UTR	6.55903	18.32977	K562	PUM2
chr6	35427515	35427581	+	CDS,intron-Proximal	5.20412	6.75320	K562	AQR
chr6	35434517	35434612	+	3'-UTR	3.92239	5.24353	K562	UPF1
chr6	35434518	35434562	+	3'-UTR	4.39231	5.20626	K562	PUM2
chr6	35433958	35434058	+	CDS,intron-Proximal	4.73016	4.40745	K562	SF3B4
chr6	35423454	35423524	+	intron-Proximal	4.79891	4.26208	K562	SF3B4
chr6	35427518	35427575	+	CDS,intron-Proximal	4.67680	3.70131	HepG2	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 7 of 7 entries

eCLIP assay for FANCE is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FANCE is not available on ENCORE database.
76 RBPs can affect the levels of FANCE.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.

76 RBPs can affect the gene expression of FANCE :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FANCE	ENSG00000112039.3	117.37060	319.71070	-1.44570	16.48680	15.53280	HepG2	SRFBP1
FANCE	ENSG00000112039.3	73.70340	193.98370	-1.39610	7.19640	5.49700	HepG2	KHSRP
FANCE	ENSG00000112039.3	266.81680	479.86460	-0.84680	6.67800	5.38360	K562	PCBP3
FANCE	ENSG00000112039.3	96.51510	204.69860	-1.08470	6.12820	5.16810	HepG2	RPLP0
FANCE	ENSG00000112039.3	214.79470	396.96040	-0.88600	8.07520	5.08710	K562	HNRNPH1
FANCE	ENSG00000112039.3	47.28060	121.74800	-1.36460	5.73880	4.91560	HepG2	BOP1
FANCE	ENSG00000112039.3	298.81680	528.95810	-0.82390	6.79220	4.76540	K562	STAU1
FANCE	ENSG00000112039.3	42.92860	130.16370	-1.60030	6.46560	4.67260	HepG2	STAU1
FANCE	ENSG00000112039.3	115.30480	237.30840	-1.04130	5.78150	4.40680	K562	FTO
FANCE	ENSG00000112039.3	42.92590	114.61880	-1.41690	5.18540	4.14230	HepG2	RRP9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 87 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.

6 RBPs can affect the splicing of FANCE :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395	35430565	35430691	35427458	35427537	35434020	35434880	-0.20000	0.00002	0.00229	2included	K562	SBDS
MXE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395	35430565	35430691	35427458	35427537	35434020	35434880	-0.15100	0.00009	0.00720	2included	K562	LIN28B
SE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395			35427458	35427537	35434020	35434880	-0.51300	0.00026	0.05907	excluded	K562	SAFB
MXE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395	35430565	35430691	35427458	35427537	35434020	35434880	-0.12800	0.00059	0.03149	2included	K562	SAFB
MXE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395	35430565	35430691	35427458	35427537	35434020	35434880	-0.13300	0.00185	0.08197	2included	K562	LARP7
A5SS	FANCE	ENSG00000112039.3	chr6	+	35425332	35425565			35425332	35425377	35425692	35425761	0.38000	0.00263	0.04260	longer	K562	AQR
MXE	FANCE	ENSG00000112039.3	chr6	+	35428328	35428395	35430565	35430691	35427458	35427537	35434020	35434880	-0.20500	0.00372	0.02804	2included	K562	AQR
A3SS	FANCE	ENSG00000112039.3	chr6	+	35427430	35427537			35427458	35427537	35427107	35427231	0.05400	0.00468	0.02724	longer	K562	AQR
SE	FANCE	ENSG00000112039.3	chr6	+	35430565	35430691			35428328	35428395	35434020	35434880	-0.08500	0.00661	0.08614	excluded	K562	HNRNPC

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FANCE

General Information

Functions

Localization

Domains (AlphaFold: FANCE)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FANCE is not avaliable on ENCORE database.

5 proteins are bound to FANCE RNA:

eCLIP assay for FANCE is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.

76 RBPs can affect the gene expression of FANCE :

The Knockdown/knockout RNA-Seq assay for FANCE is not available on ENCORE database.

6 RBPs can affect the splicing of FANCE :

The Knockdown/knockout RNA-Seq assay for FANCE is not avaliable on ENCORE database.