DNAJC19

General Information

Gene Name : DNAJC19
Gene ID : ENSG00000205981.7
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: DNAJC19)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	DNAJC19	ENSG00000205981.7	14.36	25.18	19.77	ENCSR000AEF
HepG2	DNAJC19	ENSG00000205981.7	47.67	44.70	46.19	ENCSR985KAT
K562	DNAJC19	ENSG00000205981.7	67.52	58.00	62.76	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for DNAJC19 is not avaliable on ENCORE database.

Proteins bound to RNA

DNAJC19 RNA is bound by 7 proteins.

CanvasJS.com

eCLIP assay for DNAJC19 is not avaliable on ENCORE database.

7 proteins are bound to DNAJC19 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	180707387	180707513	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.19582	30.53347	K562	DDX3X
chr3	180705965	180705999	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.53395	14.35050	K562	DDX3X
chr3	180705848	180705885	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.45600	13.82971	K562	DDX3X
chr3	180702360	180702433	-	3'-UTR,CDS,intron-Distal	3.35918	11.26600	K562	PUM2
chr3	180705999	180706017	-	5'-UTR,CDS,intron-Distal	4.75635	10.52516	K562	DDX3X
chr3	180707384	180707432	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.69522	8.30191	HepG2	DDX3X
chr3	180702326	180702420	-	3'-UTR,intron-Distal,intron-Proximal	4.96795	6.91047	K562	CPEB4
chr3	180707387	180707504	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.06570	5.39661	K562	GEMIN5
chr3	180707432	180707481	-	5'-UTR,intron-Distal	3.88154	5.22400	HepG2	DDX3X
chr3	180703753	180703785	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.53466	4.91258	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 14 entries

eCLIP assay for DNAJC19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for DNAJC19 is not available on ENCORE database.
58 RBPs can affect the levels of DNAJC19.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.

58 RBPs can affect the gene expression of DNAJC19 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
DNAJC19	ENSG00000205981.2	661.31190	1301.37210	-0.97660	15.18870	13.96510	K562	AQR
DNAJC19	ENSG00000205981.2	278.98820	555.48640	-0.99350	9.53160	8.31880	HepG2	FXR1
DNAJC19	ENSG00000205981.2	492.60110	827.91810	-0.74910	9.20800	7.92750	K562	SRSF1
DNAJC19	ENSG00000205981.2	382.89660	669.18480	-0.80540	8.77150	7.75840	K562	HNRNPC
DNAJC19	ENSG00000205981.2	354.89320	575.59270	-0.69770	8.21630	7.13740	HepG2	AUH
DNAJC19	ENSG00000205981.2	398.52930	721.47590	-0.85630	8.51680	7.12380	K562	CPSF6
DNAJC19	ENSG00000205981.2	341.84020	555.37890	-0.70020	7.26730	6.46320	HepG2	PTBP1
DNAJC19	ENSG00000205981.2	302.87890	558.81240	-0.88360	6.92060	5.95520	HepG2	MATR3
DNAJC19	ENSG00000205981.2	375.78940	601.45510	-0.67850	6.75720	5.84400	HepG2	QKI
DNAJC19	ENSG00000205981.2	772.57310	541.64860	0.51220	6.06000	5.35600	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 66 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.

25 RBPs can affect the splicing of DNAJC19 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	DNAJC19	ENSG00000205981.2	chr3	-	180705965	180706017	180705810	180705884	180707387	180707491	-0.23600	0.00000	excluded	K562	SF3B4
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705913	-0.11200	0.00000	excluded	K562	AKAP8L
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705913	-0.18600	0.00000	excluded	K562	PUS1
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705884	0.18600	0.00011	included	HepG2	PTBP1
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705884	0.19500	0.00000	included	HepG2	SRSF1
SE	DNAJC19	ENSG00000205981.2	chr3	-	180705965	180706017	180705810	180705884	180707387	180707491	-0.15500	0.00000	excluded	HepG2	SF3B4
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705913	-0.09300	0.00014	excluded	K562	UTP18
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703713	180703784	180705810	180705884	-0.16000	0.00002	excluded	K562	TARDBP
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703713	180703784	180705810	180705884	-0.15000	0.00001	excluded	K562	HNRNPU
SE	DNAJC19	ENSG00000205981.2	chr3	-	180704730	180704810	180703197	180703784	180705810	180705913	-0.12400	0.00000	excluded	K562	RBM15

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

DNAJC19

General Information

Functions

Localization

Domains (AlphaFold: DNAJC19)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for DNAJC19 is not avaliable on ENCORE database.

7 proteins are bound to DNAJC19 RNA:

eCLIP assay for DNAJC19 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.

58 RBPs can affect the gene expression of DNAJC19 :

The Knockdown/knockout RNA-Seq assay for DNAJC19 is not available on ENCORE database.

25 RBPs can affect the splicing of DNAJC19 :

The Knockdown/knockout RNA-Seq assay for DNAJC19 is not avaliable on ENCORE database.