ANKS3

General Information

Gene Name       : ANKS3
Gene ID             : ENSG00000168096.14
Essential Gene : Yes

Functions

Localization

Domains (AlphaFold: ANKS3)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878ANKS3ENSG00000168096.142.713.393.05ENCSR000AEF
HepG2ANKS3ENSG00000168096.1411.004.817.90ENCSR985KAT
K562ANKS3ENSG00000168096.148.206.257.22ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for ANKS3 is not avaliable on ENCORE database.



Proteins bound to RNA
  • ANKS3 RNA is bound by 10 proteins.  







eCLIP assay for ANKS3 is not avaliable on ENCORE database.





10 proteins are bound to ANKS3 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1647483864748455-3'-UTR,CDS,intron-Distal,intron-Proximal3.224263.01994K562BUD13
chr1647509214750971-3'-UTR,CDS,intron-Distal,intron-Proximal4.784594.13847K562AQR
chr1647467814746860-3'-UTR,intron-Distal,intron-Proximal3.264543.52724HepG2PABPN1
chr1647491474749222-3'-UTR,CDS,intron-Distal,intron-Proximal4.402485.31973HepG2SF3B4
chr1647483784748429-3'-UTR,CDS,intron-Distal,intron-Proximal4.485295.64484HepG2PRPF8
chr1647483724748443-3'-UTR,CDS,intron-Distal,intron-Proximal7.1250430.12890K562AQR
chr1647466904746773-3'-UTR,intron-Distal,intron-Proximal4.427314.52184HepG2PABPN1
chr1647551434755243-3'-UTR,CDS,intron-Distal,intron-Proximal3.982153.38114HepG2GRWD1
chr1647467864746894-3'-UTR,intron-Distal,intron-Proximal4.192754.41267HepG2PPIG
chr1647483784748431-3'-UTR,CDS,intron-Distal,intron-Proximal4.091953.12843K562PRPF8
chr1647485724748597-3'-UTR,CDS,intron-Distal3.614675.70278K562AQR
chr1647473404747414-3'-UTR,CDS,intron-Distal,intron-Proximal4.114135.80295HepG2PPIG
chr1647520564752107-3'-UTR,CDS,intron-Distal,intron-Proximal3.907156.32052K562AQR
chr1647480034748081-3'-UTR,CDS,intron-Distal,intron-Proximal6.0323013.28065K562AQR
chr1647480254748083-3'-UTR,CDS,intron-Distal,intron-Proximal3.296203.39477K562BUD13
chr1647488254748896-3'-UTR,CDS,intron-Distal4.012853.60441HepG2GRWD1
chr1647473364747418-3'-UTR,CDS,intron-Distal,intron-Proximal4.094023.61671HepG2PABPN1
chr1647479784748057-3'-UTR,CDS,intron-Distal,intron-Proximal3.147445.21025HepG2PPIG
chr1647484304748441-3'-UTR,CDS,intron-Distal4.078203.67894HepG2AQR
chr1647640134764065-3'-UTR,CDS,intron-Distal,intron-Proximal4.720535.01842HepG2PRPF8
chr1647483994748429-3'-UTR,CDS,intron-Distal,intron-Proximal5.4486014.98569HepG2AQR
chr1647768114776866-5'-UTR,intron-Distal,intron-Proximal3.971953.47293K562U2AF2
chr1647769334777000-5'-UTR,CDS,intron-Distal,intron-Proximal4.721358.44604HepG2PRPF8
chr1647841534784239-5'-UTR,intron-Distal,intron-Proximal5.020697.48769HepG2NCBP2
chr1647768154776868-5'-UTR,intron-Distal,intron-Proximal4.085676.32636HepG2U2AF2
chr1647487374748776-intron-Distal,intron-Proximal5.540079.41643K562AQR
chr1647483834748390-intron-Distal,intron-Proximal3.711503.22327HepG2AQR
chr1647701084770169-intron-Distal4.309124.65900HepG2HNRNPC
chr1647483904748399-intron-Distal,intron-Proximal4.742799.68645HepG2AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for ANKS3 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for ANKS3 is not available on ENCORE database.

  • 54 RBPs can affect the levels of ANKS3.  








The Knockdown/knockout RNA-Seq assay for ANKS3 is not available on ENCORE database.





54 RBPs can affect the gene expression of ANKS3 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
ANKS3ENSG00000168096.10218.50910113.048900.950603.548302.48960HepG2BCCIP
ANKS3ENSG00000168096.10121.2656074.781700.697302.685702.04190HepG2DNAJC2
ANKS3ENSG00000168096.10205.1770099.212801.048202.735802.14630HepG2EIF2S1
ANKS3ENSG00000168096.10234.98220109.587501.100403.299302.60250HepG2EIF4A3
ANKS3ENSG00000168096.10189.34700106.802500.826002.073201.47360HepG2EIF4B
ANKS3ENSG00000168096.10372.39110289.451500.363401.970401.44420HepG2ETF1
ANKS3ENSG00000168096.10223.09880110.733501.010503.403002.64040HepG2FXR1
ANKS3ENSG00000168096.10269.61580104.129201.372407.911206.77680HepG2HNRNPK
ANKS3ENSG00000168096.10194.9824098.000800.992402.562801.61860HepG2IGF2BP3
ANKS3ENSG00000168096.10298.14150110.772901.428307.607706.53520HepG2MAGOH
ANKS3ENSG00000168096.10290.38050113.967701.349205.514904.63560HepG2NCBP2
ANKS3ENSG00000168096.10215.52580101.395901.087802.974502.22830HepG2PABPC4
ANKS3ENSG00000168096.10258.69850115.707701.160709.355608.34730HepG2PCBP1
ANKS3ENSG00000168096.10183.10440117.755500.636803.060502.49050HepG2PTBP1
ANKS3ENSG00000168096.10156.15620212.33940-0.443402.011401.46740HepG2PUS1
ANKS3ENSG00000168096.10216.07010127.492600.761004.065903.32840HepG2QKI
ANKS3ENSG00000168096.10188.17760115.722600.701303.269102.54190HepG2RBM25
ANKS3ENSG00000168096.10202.50520117.883300.780503.264202.18170HepG2RBM27
ANKS3ENSG00000168096.10237.06470131.035100.855205.245304.53870HepG2NELFE
ANKS3ENSG00000168096.10220.83650122.069300.855205.233404.42020HepG2RECQL
ANKS3ENSG00000168096.10170.23750108.715800.646902.172301.45810HepG2RPS2
ANKS3ENSG00000168096.10135.6544074.945700.855903.727602.99940HepG2SAFB2
ANKS3ENSG00000168096.10312.45190179.327700.800904.538603.66480HepG2SF3A3
ANKS3ENSG00000168096.10255.83700122.565401.061607.049706.17450HepG2SF3B4
ANKS3ENSG00000168096.10135.7129087.396700.634802.373101.77130HepG2SMN1
ANKS3ENSG00000168096.10353.25790273.237200.370502.008401.56080HepG2SRFBP1
ANKS3ENSG00000168096.10262.80360182.941000.522502.658602.04580HepG2SUCLG1
ANKS3ENSG00000168096.10170.58590105.666000.690903.177402.28660HepG2TIA1
ANKS3ENSG00000168096.10169.6766081.766001.053105.663404.99770HepG2TIAL1
ANKS3ENSG00000168096.10159.2126082.507900.948205.100704.38240HepG2TRIM56
ANKS3ENSG00000168096.10188.16430124.960900.590402.050201.50050HepG2U2AF1
ANKS3ENSG00000168096.10129.8936065.346000.991102.322501.62560HepG2UCHL5
ANKS3ENSG00000168096.10204.93630101.262101.017003.502502.36450HepG2UPF2
ANKS3ENSG00000168096.10212.37670153.543600.467901.936601.41720HepG2UTP3
ANKS3ENSG00000168096.10184.35130108.474500.765003.121901.94930HepG2XPO5
ANKS3ENSG00000168096.10207.83570108.915100.932103.504002.69410HepG2XRN2
ANKS3ENSG00000168096.10441.16310311.389000.502503.789603.14400K562AGGF1
ANKS3ENSG00000168096.10489.36670324.015800.594804.503703.66280K562AKAP8L
ANKS3ENSG00000168096.10446.04330339.973500.391702.625901.73760K562ATP5C1
ANKS3ENSG00000168096.10657.55430304.554501.1103019.6134018.02760K562DDX47
ANKS3ENSG00000168096.10252.30860157.060000.683803.258502.26220K562EFTUD2
ANKS3ENSG00000168096.10307.85120168.113000.872704.961403.52850K562EIF3D
ANKS3ENSG00000168096.1047.54430128.28310-1.432006.239005.08170K562G3BP2
ANKS3ENSG00000168096.10267.34270195.892800.448501.897901.39210K562HNRNPC
ANKS3ENSG00000168096.10246.90770162.237600.605802.472701.52060K562IGF2BP2
ANKS3ENSG00000168096.10359.70190170.510601.0768010.410108.71520K562MAGOH
ANKS3ENSG00000168096.10268.12040151.713100.821404.901203.58830K562PCBP2
ANKS3ENSG00000168096.10157.20650246.57650-0.649402.912902.05850K562PCBP3
ANKS3ENSG00000168096.10127.06480189.12970-0.573802.487201.72980K562POLR2G
ANKS3ENSG00000168096.10282.31170165.661300.769005.383304.48400K562PTBP1
ANKS3ENSG00000168096.10454.52730595.26950-0.389202.278201.31830K562PUM1
ANKS3ENSG00000168096.10383.52950155.646701.3010010.436908.82240K562RPS19
ANKS3ENSG00000168096.10217.76620139.553100.641902.303301.40080K562RPS3
ANKS3ENSG00000168096.10228.82700133.300400.779504.764903.63100K562SF3B4
ANKS3ENSG00000168096.10245.25570153.375700.677103.600602.37130K562SRSF5
ANKS3ENSG00000168096.10252.59970164.363400.619903.114902.36450K562TARDBP
ANKS3ENSG00000168096.10281.30580158.546700.827105.495004.27910K562TIA1
ANKS3ENSG00000168096.10553.21860335.526300.721308.600007.41890K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for ANKS3 is not available on ENCORE database.





7 RBPs can affect the splicing of ANKS3 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SEANKS3ENSG00000168096.10chr16-477475047748324764051476418747799804780152-0.308000.000850.02414excludedK562RBM15
A3SSANKS3ENSG00000168096.10chr16-4751051475117247510514751135475143447515440.141000.008830.04749longerK562AQR
MXEANKS3ENSG00000168096.10chr16-477665947767814776979477717847747504774832477998047801520.591000.001640.048801includedK562PTBP1
MXEANKS3ENSG00000168096.10chr16-477665947767814776979477717847747504774832477998047801520.749000.000000.000201includedK562SRSF1
MXEANKS3ENSG00000168096.10chr16-477665947767814776979477717847747504774832477998047801520.545000.001050.027751includedK562TARDBP
MXEANKS3ENSG00000168096.10chr16-477475047748324776659477678147640514764187477998047801520.280000.002920.088751includedK562SAFB
MXEANKS3ENSG00000168096.10chr16-477665947767814776979477717847747504774832477998047801520.573000.000970.061421includedK562RBM22

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for ANKS3 is not avaliable on ENCORE database.