RP3-510D11.2

General Information

Gene Name       : RP3-510D11.2
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP3-510D11.2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP3-510D11.2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP3-510D11.2 RNA is bound by 2 proteins.  







eCLIP assay for RP3-510D11.2 is not avaliable on ENCORE database.





2 proteins are bound to RP3-510D11.2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr192431479243243+intron-Distal5.121195.93132HepG2FKBP4
chr192427599242809+intron-Distal4.269393.25012HepG2FKBP4
chr192431549243255+intron-Distal3.922223.26022HepG2PRPF4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP3-510D11.2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP3-510D11.2 is not available on ENCORE database.

  • 13 RBPs can affect the levels of RP3-510D11.2.  








The Knockdown/knockout RNA-Seq assay for RP3-510D11.2 is not available on ENCORE database.





13 RBPs can affect the gene expression of RP3-510D11.2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP3-510D11.2ENSG00000234546.218.341903.733302.296502.320201.36210HepG2AKAP8
RP3-510D11.2ENSG00000234546.217.748701.356503.709703.531902.86450HepG2BOP1
RP3-510D11.2ENSG00000234546.218.192401.245103.868903.739902.95320HepG2CPSF6
RP3-510D11.2ENSG00000234546.226.228508.411501.640602.018801.47030HepG2EIF4A3
RP3-510D11.2ENSG00000234546.222.015502.658003.050002.031401.42730HepG2HNRNPC
RP3-510D11.2ENSG00000234546.228.021908.494401.721902.231401.64020HepG2MAGOH
RP3-510D11.2ENSG00000234546.233.669708.541201.978802.842902.20420HepG2MATR3
RP3-510D11.2ENSG00000234546.218.752902.612102.843703.078302.18830HepG2PARN
RP3-510D11.2ENSG00000234546.215.462703.286002.234301.914601.39510HepG2RPS19
RP3-510D11.2ENSG00000234546.220.035103.439702.542102.432701.67890HepG2RPS2
RP3-510D11.2ENSG00000234546.219.112701.482803.688003.247602.39890HepG2SNRNP70
RP3-510D11.2ENSG00000234546.229.678702.561503.534305.809905.13590HepG2TIAL1
RP3-510D11.2ENSG00000234546.227.387405.009502.450703.715702.95670HepG2ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP3-510D11.2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP3-510D11.2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP3-510D11.2 is not avaliable on ENCORE database.