RP11-697E2.6

General Information

Gene Name       : RP11-697E2.6
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-697E2.6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-697E2.6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-697E2.6 RNA is bound by 14 proteins.  







eCLIP assay for RP11-697E2.6 is not avaliable on ENCORE database.





14 proteins are bound to RP11-697E2.6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr159081451390814569+3'-UTR,CDS4.764286.19943K562RBM15
chr159081448990814538+3'-UTR,CDS4.0383011.79269K562YBX3
chr159081526390815361+3'-UTR6.2184413.92511HepG2SUB1
chr159081503290815074+3'-UTR4.4227011.06802HepG2LIN28B
chr159081502290815126+3'-UTR4.6697523.08487K562LIN28B
chr159080956290809618+3'-UTR,CDS3.471014.05694K562IGF2BP1
chr159080950590809532+3'-UTR,CDS,intron-Proximal3.776243.84724HepG2IGF2BP1
chr159081507690815153+3'-UTR3.847075.85226K562UCHL5
chr159080953290809556+3'-UTR,CDS4.648934.33846HepG2IGF2BP1
chr159080955690809618+3'-UTR,CDS3.574023.38325HepG2IGF2BP1
chr159081526790815331+3'-UTR3.029513.21497K562NOLC1
chr159081482790814840+3'-UTR,CDS3.107235.40086K562YBX3
chr159080955690809614+3'-UTR,CDS4.238149.77241K562IGF2BP2
chr159081532190815422+3'-UTR3.627454.76828K562IGF2BP1
chr159081477290814882+3'-UTR,CDS3.944498.99604K562UPF1
chr159081480190814843+3'-UTR,CDS3.293863.34231K562RBM15
chr159081484090814910+3'-UTR,CDS3.101417.92314K562YBX3
chr159080936790809411+intron-Distal3.758623.19904K562TIA1
chr159080907790809153+CDS,intron-Distal,intron-Proximal4.282973.72779HepG2LARP4
chr159080891190809058+5'-UTR,CDS,intron-Distal3.4049911.73000K562DDX3X
chr159080907090809137+CDS,intron-Distal,intron-Proximal4.222217.02113HepG2RPS3
chr159080934490809405+intron-Distal4.570718.31731HepG2SUB1
chr159080922690809307+intron-Distal3.114656.47070K562IGF2BP2
chr159081361890813696+intron-Distal4.118494.07628HepG2PTBP1
chr159080915390809288+intron-Distal,intron-Proximal5.7021011.16260HepG2LARP4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-697E2.6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-697E2.6 is not available on ENCORE database.

  • 1 RBPs can affect the levels of RP11-697E2.6.  








The Knockdown/knockout RNA-Seq assay for RP11-697E2.6 is not available on ENCORE database.





1 RBPs can affect the gene expression of RP11-697E2.6 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-697E2.6ENSG00000261147.133.284205.635602.562103.817703.13040K562HNRNPC
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-697E2.6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-697E2.6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-697E2.6 is not avaliable on ENCORE database.