RP11-392O1.4

General Information

Gene Name       : RP11-392O1.4
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-392O1.4)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-392O1.4 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-392O1.4 RNA is bound by 17 proteins.  







eCLIP assay for RP11-392O1.4 is not avaliable on ENCORE database.





17 proteins are bound to RP11-392O1.4 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr174162241141622488+intron-Distal4.241038.49542HepG2NCBP2
chr174162289641622950+intron-Distal3.493143.23984HepG2HNRNPUL1
chr174162218741622324+intron-Distal,intron-Proximal4.4012416.63709HepG2NCBP2
chr174162287841622941+intron-Distal4.496294.22593HepG2DGCR8
chr174162262641622705+intron-Distal3.151485.77795HepG2FUS
chr174162667241626815+intron-Distal3.571479.02517HepG2HNRNPL
chr174162259241622696+intron-Distal3.9859312.51192HepG2NKRF
chr174162278841622846+intron-Distal3.664674.33898HepG2FAM120A
chr174162260341622710+intron-Distal4.1718310.98705HepG2PRPF4
chr174162307341623208+intron-Distal5.2518432.28761HepG2CSTF2T
chr174163679541636967+intron-Distal3.391524.13948HepG2PRPF4
chr174162331741623375+intron-Distal3.791574.97100HepG2TIAL1
chr174162306941623152+intron-Distal3.199177.03748HepG2GTF2F1
chr174162258341622649+intron-Distal4.0540911.34920HepG2IGF2BP1
chr174162242441622469+intron-Distal3.584474.51950HepG2FASTKD2
chr174162761041627685+intron-Distal3.477613.55754HepG2U2AF2
chr174162287341622944+intron-Distal4.8526218.99658HepG2FAM120A
chr174162330941623386+intron-Distal7.136719.14790HepG2DKC1
chr174162333041623385+intron-Distal4.202996.92108HepG2FASTKD2
chr174162353041623619+intron-Distal3.246555.34957HepG2NKRF
chr174162356041623618+intron-Distal3.7014211.90884HepG2CSTF2T
chr174162278641622841+intron-Distal4.671837.09127HepG2PRPF4
chr174162306641623150+intron-Distal3.732969.08293HepG2PRPF4
chr174162241341622488+intron-Distal3.6001513.75543HepG2CSTF2T
chr174162240741622476+intron-Distal3.152817.11814HepG2PRPF4
chr174162288641622947+intron-Distal5.2944110.19497HepG2GTF2F1
chr174162414041624187+intron-Distal3.312477.22172HepG2CSTF2T
chr174162223341622327+intron-Distal,intron-Proximal3.423103.12708HepG2RBM5
chr174162262941622705+intron-Distal3.449264.71970HepG2TIAL1
chr174162220641622319+intron-Distal,intron-Proximal3.2313110.85658HepG2CSTF2T
chr174162306041623138+intron-Distal3.250076.67577HepG2IGF2BP1
chr174162286441622940+intron-Distal4.7348415.00714HepG2PRPF4
chr174162253841622583+intron-Distal4.349984.33846HepG2IGF2BP1
chr174162287741622949+intron-Distal4.0376818.62339HepG2CSTF2T
chr174162287341622939+intron-Distal5.251125.05945HepG2FKBP4
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-392O1.4 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-392O1.4 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-392O1.4 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-392O1.4 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-392O1.4 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-392O1.4 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-392O1.4 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-392O1.4 is not avaliable on ENCORE database.