RP11-278A23.2

General Information

Gene Name : RP11-278A23.2
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP11-278A23.2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP11-278A23.2 is not avaliable on ENCORE database.

Proteins bound to RNA

RP11-278A23.2 RNA is bound by 14 proteins.

eCLIP assay for RP11-278A23.2 is not avaliable on ENCORE database.

14 proteins are bound to RP11-278A23.2 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	87773289	87773386	-	intron-Distal,intron-Proximal	6.19476	19.22721	K562	EIF4G2
chr16	87776879	87777012	-	intron-Distal	3.30096	6.60564	HepG2	ILF3
chr16	87780095	87780166	-	intron-Distal	5.44909	11.13888	HepG2	HNRNPM
chr16	87780728	87780801	-	intron-Distal	4.36675	4.90578	HepG2	HNRNPM
chr16	87774140	87774183	-	intron-Distal,intron-Proximal	4.45968	5.66217	K562	NONO
chr16	87781226	87781258	-	intron-Distal	3.25216	4.01575	K562	NONO
chr16	87778892	87778966	-	intron-Distal	3.51673	8.16137	K562	EIF4G2
chr16	87773231	87773277	-	intron-Distal,intron-Proximal	4.44893	5.18738	K562	TARDBP
chr16	87774038	87774174	-	intron-Distal,intron-Proximal	4.95125	9.95168	K562	FUS
chr16	87779026	87779072	-	intron-Distal	3.66410	5.61385	K562	EIF4G2
chr16	87774078	87774094	-	intron-Distal,intron-Proximal	3.93839	3.37414	K562	CSTF2T
chr16	87778748	87778866	-	intron-Distal	3.88063	5.98771	K562	GTF2F1
chr16	87774101	87774178	-	intron-Distal,intron-Proximal	5.41437	21.09358	K562	EIF4G2
chr16	87773288	87773311	-	intron-Distal,intron-Proximal	4.61694	3.17679	K562	DDX52
chr16	87773663	87773722	-	intron-Distal	5.62243	16.78191	K562	EIF4G2
chr16	87774010	87774056	-	intron-Distal	4.57683	5.40320	K562	NONO
chr16	87773614	87773663	-	intron-Distal	6.09928	10.49187	K562	EIF4G2
chr16	87774494	87774543	-	intron-Distal	3.50945	4.48585	K562	NONO
chr16	87779277	87779342	-	intron-Distal	4.16899	6.94650	K562	EIF4G2
chr16	87776585	87776650	-	intron-Distal	4.96896	6.09831	K562	HNRNPM
chr16	87773617	87773746	-	intron-Distal	3.10669	5.45071	K562	EWSR1
chr16	87773372	87773462	-	intron-Distal	3.08111	7.10871	K562	CSTF2T
chr16	87773295	87773345	-	intron-Distal,intron-Proximal	4.19261	7.48999	K562	NONO
chr16	87779931	87779943	-	intron-Distal	6.31708	11.49593	K562	PTBP1
chr16	87774262	87774440	-	intron-Distal,intron-Proximal	3.60361	5.03073	K562	FUS
chr16	87773413	87773460	-	intron-Distal	3.63018	4.38648	K562	DDX52
chr16	87778437	87778527	-	intron-Distal	7.36571	50.36113	K562	TARDBP
chr16	87779943	87779962	-	intron-Distal	5.07303	9.53330	K562	PTBP1
chr16	87773285	87773403	-	intron-Distal,intron-Proximal	4.74051	5.97891	K562	FAM120A
chr16	87773391	87773438	-	intron-Distal	4.45968	5.66217	K562	NONO
chr16	87773912	87774006	-	intron-Distal	4.31347	5.73677	K562	FUS
chr16	87780068	87780164	-	intron-Distal	4.78391	15.52235	K562	HNRNPM
chr16	87774110	87774178	-	intron-Distal,intron-Proximal	5.20379	7.43305	K562	AATF
chr16	87773903	87773973	-	intron-Distal	4.51406	16.27431	K562	EIF4G2
chr16	87779893	87779988	-	intron-Distal	3.94536	11.82585	K562	MATR3
chr16	87778759	87778811	-	intron-Distal	3.33712	3.77567	K562	NONO
chr16	87773891	87773953	-	intron-Distal	3.59165	7.88956	K562	CSTF2T
chr16	87773370	87773422	-	intron-Distal	4.41898	3.28464	K562	EWSR1
chr16	87774309	87774371	-	intron-Distal,intron-Proximal	4.77694	11.23742	K562	EIF4G2
chr16	87773908	87773944	-	intron-Distal	3.21514	3.93923	K562	DDX52
chr16	87773611	87773757	-	intron-Distal	3.54935	5.83933	K562	FUS
chr16	87774100	87774172	-	intron-Distal,intron-Proximal	4.15225	5.10007	K562	FAM120A
chr16	87779895	87779931	-	intron-Distal	6.26505	51.69545	K562	PTBP1
chr16	87778532	87778602	-	intron-Distal	5.50936	22.59872	K562	TARDBP
chr16	87775136	87775186	-	intron-Distal	3.74194	5.99692	K562	HNRNPM
chr16	87773894	87773978	-	intron-Distal	3.97096	3.38753	K562	FAM120A
chr16	87778759	87778842	-	intron-Distal	3.23804	5.87066	K562	CSTF2T
chr16	87779456	87779548	-	intron-Distal	3.50493	9.32356	K562	NONO
chr16	87774056	87774112	-	intron-Distal,intron-Proximal	3.89310	6.09306	K562	NONO
chr16	87779843	87779893	-	intron-Distal	4.15426	15.29220	K562	MATR3
chr16	87779843	87779895	-	intron-Distal	6.27585	400.00000	K562	PTBP1
chr16	87778447	87778533	-	intron-Distal	5.18843	14.37366	K562	EIF4G2
chr16	87778395	87778437	-	intron-Distal	4.97074	8.39033	K562	TARDBP
chr16	87773497	87773531	-	intron-Distal	3.26756	3.99385	K562	CSTF2T
chr16	87773277	87773328	-	intron-Distal,intron-Proximal	3.90993	3.08314	K562	TARDBP
chr16	87773386	87773460	-	intron-Distal	5.18102	19.17723	K562	EIF4G2
chr16	87773286	87773370	-	intron-Distal,intron-Proximal	3.36744	3.85467	K562	EWSR1
chr16	87779962	87780019	-	intron-Distal	4.71778	8.75579	K562	PTBP1
chr16	87774572	87774663	-	intron-Distal,intron-Proximal	3.83882	9.97692	K562	NONO
chr16	87780220	87780279	-	intron-Distal	5.14284	9.54707	K562	NONO
chr16	87778390	87778447	-	intron-Distal	4.81817	7.19397	K562	EIF4G2
chr16	87779848	87779892	-	intron-Distal	5.04799	16.67986	HepG2	PTBP1
chr16	87774315	87774359	-	intron-Distal,intron-Proximal	3.92494	5.99425	K562	CSTF2T
chr16	87780723	87780814	-	intron-Distal	4.29438	8.40323	K562	NONO
chr16	87774227	87774254	-	intron-Distal	4.64079	6.64314	K562	CSTF2T
chr16	87774097	87774153	-	intron-Distal,intron-Proximal	3.94235	3.63902	HepG2	CSTF2T
chr16	87780515	87780557	-	intron-Distal	4.37793	5.34533	K562	NONO
chr16	87779892	87779959	-	intron-Distal	6.39087	22.19046	HepG2	PTBP1
chr16	87774113	87774177	-	intron-Distal,intron-Proximal	4.97582	8.61093	K562	CSTF2T
chr16	87778881	87778958	-	intron-Distal	3.05255	4.07903	K562	EWSR1
chr16	87774198	87774301	-	intron-Distal,intron-Proximal	3.95366	6.68220	K562	TARDBP
chr16	87774288	87774342	-	intron-Distal,intron-Proximal	3.56037	6.60059	K562	NONO
chr16	87781313	87781370	-	intron-Distal,intron-Proximal	3.82945	6.59396	K562	NONO
chr16	87773931	87774003	-	intron-Distal	4.09441	8.18170	K562	NONO
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP11-278A23.2 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP11-278A23.2 is not available on ENCORE database.
No RBPs affect the gene expression of RP11-278A23.2 on ENCORE database.

RP11-278A23.2

General Information

Functions

Localization

Domains (AlphaFold: RP11-278A23.2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP11-278A23.2 is not avaliable on ENCORE database.

14 proteins are bound to RP11-278A23.2 RNA:

eCLIP assay for RP11-278A23.2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP11-278A23.2 is not available on ENCORE database.

No RBPs affect the gene expression of RP11-278A23.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-278A23.2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP11-278A23.2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP11-278A23.2 is not avaliable on ENCORE database.