RP11-145E5.5

General Information

Gene Name       : RP11-145E5.5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-145E5.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-145E5.5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-145E5.5 RNA is bound by 18 proteins.  







eCLIP assay for RP11-145E5.5 is not avaliable on ENCORE database.





18 proteins are bound to RP11-145E5.5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr92181674021816778+5'-UTR,CDS,intron-Proximal3.355447.74581HepG2BCLAF1
chr92180275021802828+5'-UTR,CDS,intron-Proximal3.389126.92749HepG2PRPF8
chr92181799721818069+5'-UTR,CDS,intron-Proximal4.043264.86518HepG2BUD13
chr92181802821818071+5'-UTR,CDS,intron-Proximal4.261625.79432HepG2BCLAF1
chr92181546421815523+CDS,intron-Proximal3.430965.90680HepG2PPIG
chr92181670921816772+5'-UTR,CDS,intron-Proximal4.1174014.06572HepG2PPIG
chr92181803121818077+5'-UTR,CDS,intron-Proximal4.448789.41951HepG2PPIG
chr92181808621818205+5'-UTR,CDS,intron-Proximal4.241284.94878HepG2GRWD1
chr92186581921865894+3'-UTR,intron-Distal3.480723.31157HepG2KHSRP
chr92187853321878579+intron-Distal4.366334.45655HepG2BCCIP
chr92188675821886810+intron-Distal4.330574.31871HepG2HNRNPM
chr92187436321874453+intron-Distal3.950973.22073HepG2KHSRP
chr92188670921886855+intron-Distal3.674444.10380HepG2MATR3
chr92180294921803016+intron-Distal,intron-Proximal3.192264.61388HepG2HNRNPL
chr92186876421868819+intron-Distal3.800214.87826HepG2MATR3
chr92188501421885068+intron-Distal5.317005.58765HepG2QKI
chr92186597921866054+3'-UTR,intron-Distal3.758457.65929HepG2CSTF2
chr92192715721927232+intron-Distal4.506824.30850HepG2QKI
chr92187137021871483+intron-Distal3.123394.00631HepG2PTBP1
chr92185463121854706+3'-UTR,CDS,intron-Distal3.512365.58370HepG2PPIG
chr92188495621885014+intron-Distal5.805747.43163HepG2QKI
chr92182403221824108+intron-Distal3.525975.06177HepG2SUGP2
chr92186950921869649+intron-Distal4.275758.25026HepG2MATR3
chr92185462821854678+3'-UTR,CDS,intron-Distal,intron-Proximal3.372823.28366HepG2BCLAF1
chr92182403221824111+intron-Distal4.265743.27829HepG2MATR3
chr92187445721874520+intron-Distal4.553614.20763HepG2U2AF2
chr92193471321934778+intron-Distal3.878723.35877HepG2UPF1
chr92187811921878194+intron-Distal3.592694.94624HepG2MATR3
chr92191508121915131+intron-Distal5.150888.94250HepG2PTBP1
chr92187960021879679+intron-Distal3.832634.86210HepG2HNRNPM
chr92180301621803097+intron-Distal,intron-Proximal3.125555.08563HepG2HNRNPL
chr92183320121833248+intron-Distal4.190053.63454HepG2SUGP2
chr92188656121886655+intron-Distal3.977533.16028HepG2SUGP2
chr92180286021802916+5'-UTR,CDS,intron-Distal,intron-Proximal4.243315.09344HepG2XPO5
chr92188930321889359+intron-Distal4.036023.51329HepG2MATR3
chr92185606721856170+intron-Distal4.174117.29386HepG2U2AF2
chr92186939521869509+intron-Distal4.628279.41611HepG2MATR3
chr92188822021888271+intron-Distal4.678575.94008HepG2HNRNPM
chr92187079021870842+intron-Distal3.604055.99504HepG2HNRNPC
chr92185929321859345+3'-UTR,CDS,intron-Distal,intron-Proximal3.830624.79983HepG2U2AF2
chr92188820921888266+intron-Distal4.576485.15027HepG2MATR3
chr92186953121869648+intron-Distal3.769918.74394HepG2PTBP1
chr92181561321815671+intron-Distal,intron-Proximal3.049023.63916HepG2HNRNPC
chr92186940121869531+intron-Distal4.312557.55717HepG2PTBP1
chr92186674521866808+3'-UTR,intron-Distal3.160114.06762HepG2U2AF2
chr92183793921838020+3'-UTR,CDS,intron-Distal,intron-Proximal4.0549310.57347HepG2PPIG
chr92186709821867157+intron-Distal4.119493.22073HepG2KHSRP
chr92182054421820641+intron-Distal3.173693.35050HepG2SUGP2
chr92185937821859462+3'-UTR,CDS,intron-Distal,intron-Proximal3.987555.73990HepG2PRPF8
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-145E5.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-145E5.5 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-145E5.5 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-145E5.5 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-145E5.5 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-145E5.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-145E5.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-145E5.5 is not avaliable on ENCORE database.