MTRNR2L8

General Information

Gene Name       : MTRNR2L8
Gene ID             : ENSG00000255823.4
Essential Gene : No

Functions

Localization

Domains (AlphaFold: MTRNR2L8)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878MTRNR2L8ENSG00000255823.40.000.020.01ENCSR000AEF
HepG2MTRNR2L8ENSG00000255823.40.000.000.00ENCSR985KAT
K562MTRNR2L8ENSG00000255823.40.060.080.07ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for MTRNR2L8 is not avaliable on ENCORE database.



Proteins bound to RNA
  • MTRNR2L8 RNA is bound by 12 proteins.  







eCLIP assay for MTRNR2L8 is not avaliable on ENCORE database.





12 proteins are bound to MTRNR2L8 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr111052966610529699-3'-UTR5.872048.67919HepG2DHX30
chr111052988810529943-5'-UTR3.743213.85588HepG2ZNF800
chr111052989610529950-5'-UTR3.579023.47634HepG2FTO
chr111052989410529933-5'-UTR4.068173.45716HepG2AKAP1
chr111052982310529846-5'-UTR5.7705220.93159K562DHX30
chr111053059410530636-5'-UTR5.162533.26683HepG2FASTKD2
chr111052988910529938-5'-UTR3.663373.27276HepG2HNRNPL
chr111052988910529951-5'-UTR3.5923812.08527HepG2PABPN1
chr111052985110529865-5'-UTR3.469145.15500HepG2BCLAF1
chr111052988710529938-5'-UTR4.798276.65733HepG2DHX30
chr111052984610529878-5'-UTR4.348743.63670HepG2HNRNPU
chr111052989210529943-5'-UTR6.3100513.95734HepG2BCLAF1
chr111052988810529952-5'-UTR4.797787.15677HepG2SSB
chr111053060010530630-5'-UTR4.4068720.53588K562FASTKD2
chr111052989210529942-5'-UTR3.509918.24168K562FUS
chr111052981610529851-5'-UTR6.1215218.55193HepG2DHX30
chr111052985110529880-5'-UTR5.1777610.39735HepG2DHX30
chr111052988610529946-5'-UTR5.5716314.93712HepG2PCBP1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for MTRNR2L8 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for MTRNR2L8 is not available on ENCORE database.

  • 1 RBPs can affect the levels of MTRNR2L8.  








The Knockdown/knockout RNA-Seq assay for MTRNR2L8 is not available on ENCORE database.





1 RBPs can affect the gene expression of MTRNR2L8 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
MTRNR2L8ENSG00000255823.148.780406.365102.937906.642404.56560K562PNPT1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for MTRNR2L8 is not available on ENCORE database.






No RBPs affect the alternative splcing events of MTRNR2L8 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for MTRNR2L8 is not avaliable on ENCORE database.