AC005280.1

General Information

Gene Name       : AC005280.1
Gene ID             : ENSG00000251393.3
Essential Gene : No

Functions

Localization

Domains (AlphaFold: AC005280.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878AC005280.1ENSG00000251393.30.000.000.00ENCSR000AEF
HepG2AC005280.1ENSG00000251393.34.742.533.63ENCSR985KAT
K562AC005280.1ENSG00000251393.30.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for AC005280.1 is not avaliable on ENCORE database.



Proteins bound to RNA

  • NO known proteins bind on AC005280.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for AC005280.1 is not avaliable on ENCORE database.






NO known proteins are bound to AC005280.1 RNA with finished eCLIP experiments on ENCORE database.





eCLIP assay for AC005280.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for AC005280.1 is not available on ENCORE database.

  • 18 RBPs can affect the levels of AC005280.1.  








The Knockdown/knockout RNA-Seq assay for AC005280.1 is not available on ENCORE database.





18 RBPs can affect the gene expression of AC005280.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
AC005280.1ENSG00000170468.5105.342800.0000099999.999907.068005.49790HepG2CCAR1
AC005280.1ENSG00000170468.568.243000.0000099999.9999020.6497017.66190HepG2FAM120A
AC005280.1ENSG00000170468.5146.928200.0000099999.999902.468001.68570HepG2LARP4
AC005280.1ENSG00000170468.5109.174900.0000099999.9999029.8912027.91580HepG2MAGOH
AC005280.1ENSG00000170468.5105.499000.0000099999.999904.284501.95330HepG2RBM17
AC005280.1ENSG00000170468.5241.9896040.438602.581005.347404.64970HepG2ZNF622
AC005280.1ENSG00000170468.50.0000092.73750-99999.999997.773205.36840K562BUD13
AC005280.1ENSG00000170468.5109.4314026.344502.054402.680701.59240K562CPEB4
AC005280.1ENSG00000170468.569.643100.0000099999.9999018.8571015.47880K562GEMIN5
AC005280.1ENSG00000170468.50.00000129.73660-99999.999999.291307.84960K562HSPD1
AC005280.1ENSG00000170468.551.919300.0000099999.999906.145404.98050K562MTPAP
AC005280.1ENSG00000170468.5111.876800.0000099999.999906.410703.81620K562NUFIP2
AC005280.1ENSG00000170468.560.628200.0000099999.9999014.4871010.39010K562DROSHA
AC005280.1ENSG00000170468.5100.965500.0000099999.9999023.0053019.32780K562SF1
AC005280.1ENSG00000170468.569.210400.0000099999.9999019.0951015.30880K562SMN1
AC005280.1ENSG00000170468.50.00000125.54920-99999.999999.198006.60720K562SSRP1
AC005280.1ENSG00000170468.50.00000114.80400-99999.999998.848406.54590K562STAU1
AC005280.1ENSG00000170468.50.00000111.81650-99999.999998.776206.21930K562TRIP6
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for AC005280.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of AC005280.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for AC005280.1 is not avaliable on ENCORE database.