ZNF384

General Information

Gene Name : ZNF384
Gene ID : ENSG00000126746.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF384)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF384	ENSG00000126746.17	41.17	55.46	48.31	ENCSR000AEF
HepG2	ZNF384	ENSG00000126746.17	48.01	37.76	42.88	ENCSR985KAT
K562	ZNF384	ENSG00000126746.17	44.87	43.58	44.22	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF384 RNA is bound by 20 proteins.

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eCLIP assay for ZNF384 is not avaliable on ENCORE database.

20 proteins are bound to ZNF384 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr12	6797385	6797451	-	5'-UTR,intron-Distal,intron-Proximal	5.12977	16.10260	HepG2	SF3B4
chr12	6798039	6798088	-	5'-UTR,intron-Distal,intron-Proximal	4.84809	14.76135	HepG2	PRPF4
chr12	6788008	6788149	-	CDS,intron-Distal,intron-Proximal	4.46956	11.40635	HepG2	PRPF8
chr12	6784786	6784882	-	intron-Distal	4.93887	10.82244	HepG2	XPO5
chr12	6797970	6798039	-	5'-UTR,intron-Distal,intron-Proximal	3.74536	10.63195	HepG2	PRPF4
chr12	6787291	6787384	-	CDS,intron-Distal,intron-Proximal	3.66750	9.28015	HepG2	GRWD1
chr12	6787286	6787348	-	CDS,intron-Distal,intron-Proximal	4.06436	8.74774	HepG2	PPIG
chr12	6797960	6798093	-	5'-UTR,intron-Distal,intron-Proximal	4.05406	8.45395	HepG2	NCBP2
chr12	6797998	6798107	-	5'-UTR,intron-Distal,intron-Proximal	5.12168	8.23441	K562	GTF2F1
chr12	6797832	6797937	-	5'-UTR,intron-Distal,intron-Proximal	4.83964	8.13169	HepG2	PRPF4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 44 entries

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF384 is not available on ENCORE database.
39 RBPs can affect the levels of ZNF384.

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The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

39 RBPs can affect the gene expression of ZNF384 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF384	ENSG00000126746.13	3213.38880	1398.05480	1.20060	29.68100	27.96150	K562	AQR
ZNF384	ENSG00000126746.13	592.60230	1218.75920	-1.04030	12.23300	11.19340	HepG2	AKAP1
ZNF384	ENSG00000126746.13	1142.22340	683.59540	0.74050	9.51990	7.98820	K562	EIF4A3
ZNF384	ENSG00000126746.13	593.26790	1002.88700	-0.75740	6.79390	5.86030	HepG2	DDX6
ZNF384	ENSG00000126746.13	1203.72030	766.32680	0.65140	6.89420	5.70900	K562	PRPF8
ZNF384	ENSG00000126746.13	1875.00080	1262.04680	0.57100	6.38790	5.45100	HepG2	U2AF1
ZNF384	ENSG00000126746.13	1275.50180	971.99490	0.39190	5.96740	5.05880	HepG2	CKAP4
ZNF384	ENSG00000126746.13	1608.54800	1249.85990	0.36390	5.35960	4.69250	HepG2	SSB
ZNF384	ENSG00000126746.13	873.15520	576.74180	0.59820	5.72520	4.46540	K562	SF3B4
ZNF384	ENSG00000126746.13	1924.69300	1524.89630	0.33580	4.60460	3.86470	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 40 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

28 RBPs can affect the splicing of ZNF384 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6787292	6787626	6788111	6788349	-0.36700	0.00038	excluded	K562	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698	6779925	6780004	6782381	6782606	-0.14900	0.00022	excluded	K562	PRPF8
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6787292	6787626	6788111	6788349	-0.37400	0.00000	excluded	HepG2	U2AF1
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6787292	6787626	6788111	6788349	-0.54600	0.00002	excluded	HepG2	U2AF2
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6787292	6787626	6788111	6788349	-0.33000	0.00000	excluded	K562	AQR
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698	6779925	6780004	6782381	6782606	0.23800	0.00029	included	HepG2	HNRNPA1
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698	6779925	6780004	6782381	6782606	-0.14500	0.00044	excluded	K562	EFTUD2
SE	ZNF384	ENSG00000126746.13	chr12	-	6781515	6781698	6779925	6780004	6782381	6782606	0.23800	0.00008	included	HepG2	HNRNPU
SE	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787876	6787292	6787626	6788111	6788349	-0.33200	0.00000	excluded	K562	HNRNPC
A3SS	ZNF384	ENSG00000126746.13	chr12	-	6787828	6787985	6787828	6787876	6788111	6788349	0.28300	0.00000	longer	K562	AQR

Showing 1 to 10 of 47 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF384

General Information

Functions

Localization

Domains (AlphaFold: ZNF384)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

20 proteins are bound to ZNF384 RNA:

eCLIP assay for ZNF384 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

39 RBPs can affect the gene expression of ZNF384 :

The Knockdown/knockout RNA-Seq assay for ZNF384 is not available on ENCORE database.

28 RBPs can affect the splicing of ZNF384 :

The Knockdown/knockout RNA-Seq assay for ZNF384 is not avaliable on ENCORE database.