ZNF23

General Information

Gene Name : ZNF23
Gene ID : ENSG00000167377.18
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ZNF23)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ZNF23	ENSG00000167377.18	8.46	7.69	8.08	ENCSR000AEF
HepG2	ZNF23	ENSG00000167377.18	6.28	10.88	8.58	ENCSR985KAT
K562	ZNF23	ENSG00000167377.18	8.92	8.41	8.66	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ZNF23 is not avaliable on ENCORE database.

Proteins bound to RNA

ZNF23 RNA is bound by 2 proteins.

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eCLIP assay for ZNF23 is not avaliable on ENCORE database.

2 proteins are bound to ZNF23 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	71487169	71487245	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.95617	3.41051	HepG2	SRSF1
chr16	71482543	71482602	-	3'-UTR,CDS,intron-Distal	4.22048	3.04123	K562	LIN28B
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for ZNF23 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ZNF23 is not available on ENCORE database.
55 RBPs can affect the levels of ZNF23.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ZNF23 is not available on ENCORE database.

55 RBPs can affect the gene expression of ZNF23 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ZNF23	ENSG00000167377.13	1549.68210	553.61260	1.48490	22.12820	20.65030	K562	AQR
ZNF23	ENSG00000167377.13	455.07400	201.81200	1.17300	13.33170	11.47030	K562	EIF4A3
ZNF23	ENSG00000167377.13	968.38600	602.50060	0.68450	12.08440	11.23370	HepG2	SRFBP1
ZNF23	ENSG00000167377.13	992.05170	638.22050	0.63630	9.80910	8.78890	HepG2	ETF1
ZNF23	ENSG00000167377.13	621.05340	328.08310	0.92060	9.57650	8.37200	HepG2	CPSF6
ZNF23	ENSG00000167377.13	1222.14530	755.23080	0.69430	8.73450	7.27300	K562	PUF60
ZNF23	ENSG00000167377.13	384.22750	209.87690	0.87230	8.24560	7.27100	K562	FXR1
ZNF23	ENSG00000167377.13	193.28370	359.85980	-0.89670	7.71220	6.75290	K562	RBM15
ZNF23	ENSG00000167377.13	593.96910	378.22170	0.65110	7.63780	6.70900	HepG2	PCBP1
ZNF23	ENSG00000167377.13	481.62820	261.35580	0.88180	7.23560	6.02520	K562	PRPF8
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 61 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ZNF23 is not available on ENCORE database.

4 RBPs can affect the splicing of ZNF23 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ZNF23	ENSG00000167377.13	chr16	-	71484496	71484618	71481512	71483788	71487145	71487253	0.63600	0.00005	0.00148	included	K562	HNRNPC
SE	ZNF23	ENSG00000167377.13	chr16	-	71484496	71484618	71481512	71483788	71487145	71487253	-0.39700	0.00016	0.02424	excluded	K562	FMR1
SE	ZNF23	ENSG00000167377.13	chr16	-	71484496	71484618	71481512	71483788	71487145	71487253	-0.35900	0.00040	0.07843	excluded	K562	METAP2
A3SS	ZNF23	ENSG00000167377.13	chr16	-	71487944	71488164	71487944	71488121	71490666	71490731	0.45800	0.01611	0.07948	longer	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ZNF23

General Information

Functions

Localization

Domains (AlphaFold: ZNF23)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ZNF23 is not avaliable on ENCORE database.

2 proteins are bound to ZNF23 RNA:

eCLIP assay for ZNF23 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ZNF23 is not available on ENCORE database.

55 RBPs can affect the gene expression of ZNF23 :

The Knockdown/knockout RNA-Seq assay for ZNF23 is not available on ENCORE database.

4 RBPs can affect the splicing of ZNF23 :

The Knockdown/knockout RNA-Seq assay for ZNF23 is not avaliable on ENCORE database.