PKD1L2

General Information

Gene Name : PKD1L2
Gene ID : ENSG00000166473.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PKD1L2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PKD1L2	ENSG00000166473.17	0.00	0.00	0.00	ENCSR000AEF
HepG2	PKD1L2	ENSG00000166473.17	3.48	2.89	3.19	ENCSR985KAT
K562	PKD1L2	ENSG00000166473.17	0.01	0.01	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PKD1L2 is not avaliable on ENCORE database.

Proteins bound to RNA

PKD1L2 RNA is bound by 2 proteins.

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eCLIP assay for PKD1L2 is not avaliable on ENCORE database.

2 proteins are bound to PKD1L2 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr16	81202167	81202221	-	intron-Distal	4.94666	5.18780	K562	AGGF1
chr16	81164174	81164243	-	CDS,intron-Distal	4.10621	3.49332	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 2 of 2 entries

eCLIP assay for PKD1L2 is not avaliable on ENCORE database.

Summary
DE Affected by

Diffrential Expression

The Knockdown/knockout assay for PKD1L2 is not available on ENCORE database.
69 RBPs can affect the levels of PKD1L2.

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The Knockdown/knockout RNA-Seq assay for PKD1L2 is not available on ENCORE database.

69 RBPs can affect the gene expression of PKD1L2 :

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Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PKD1L2	ENSG00000166473.12	1072.83120	87.24300	3.62010	173.77300	170.89470	HepG2	SRSF9
PKD1L2	ENSG00000166473.12	491.88970	185.93730	1.40340	21.73310	20.67570	HepG2	SRFBP1
PKD1L2	ENSG00000166473.12	287.87820	75.59330	1.92900	16.29900	14.96350	HepG2	DDX6
PKD1L2	ENSG00000166473.12	250.92780	72.62210	1.78870	14.10140	12.83130	HepG2	EIF2S1
PKD1L2	ENSG00000166473.12	220.89830	73.91380	1.57940	11.41220	10.12340	HepG2	CPSF6
PKD1L2	ENSG00000166473.12	244.28520	96.37750	1.34170	11.07010	10.06660	HepG2	TAF15
PKD1L2	ENSG00000166473.12	228.76660	104.85800	1.12530	9.19830	8.26220	HepG2	TRIM56
PKD1L2	ENSG00000166473.12	264.20290	131.83470	1.00280	8.71830	7.88710	HepG2	ZNF622
PKD1L2	ENSG00000166473.12	223.31710	109.25510	1.03130	8.39010	7.18150	HepG2	ILF2
PKD1L2	ENSG00000166473.12	151.25070	397.00650	-1.39220	8.26080	6.90150	HepG2	RPS3A
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 74 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PKD1L2

General Information

Functions

Localization

Domains (AlphaFold: PKD1L2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PKD1L2 is not avaliable on ENCORE database.

2 proteins are bound to PKD1L2 RNA:

eCLIP assay for PKD1L2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PKD1L2 is not available on ENCORE database.

69 RBPs can affect the gene expression of PKD1L2 :

The Knockdown/knockout RNA-Seq assay for PKD1L2 is not available on ENCORE database.

No RBPs affect the alternative splcing events of PKD1L2 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for PKD1L2 is not avaliable on ENCORE database.