NDUFB2

General Information

Gene Name : NDUFB2
Gene ID : ENSG00000090266.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFB2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFB2	ENSG00000090266.12	30.05	74.38	52.21	ENCSR000AEF
HepG2	NDUFB2	ENSG00000090266.12	127.31	90.06	108.69	ENCSR985KAT
K562	NDUFB2	ENSG00000090266.12	210.62	147.79	179.20	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFB2 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFB2 RNA is bound by 21 proteins.

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eCLIP assay for NDUFB2 is not avaliable on ENCORE database.

21 proteins are bound to NDUFB2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr7	140396506	140396623	+	5'-UTR,CDS,intron-Distal	4.98084	400.00000	K562	DDX3X
chr7	140402664	140402747	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.79015	67.48674	K562	DDX3X
chr7	140396631	140396643	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.17962	36.54412	K562	DDX3X
chr7	140396531	140396648	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.64985	28.03082	HepG2	DDX3X
chr7	140402747	140402787	+	3'-UTR,CDS,intron-Distal	3.45438	23.78131	K562	DDX3X
chr7	140396556	140396627	+	5'-UTR,CDS,intron-Distal	3.66041	19.03177	K562	FTO
chr7	140396627	140396643	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.43669	18.79942	K562	FTO
chr7	140402664	140402746	+	3'-UTR,CDS,intron-Distal,intron-Proximal	4.84515	18.38666	K562	FTO
chr7	140406378	140406434	+	3'-UTR,intron-Distal	5.46228	17.53659	K562	PABPC4
chr7	140404677	140404765	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.15538	13.05232	HepG2	LARP4
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 41 entries

eCLIP assay for NDUFB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFB2 is not available on ENCORE database.
71 RBPs can affect the levels of NDUFB2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFB2 is not available on ENCORE database.

71 RBPs can affect the gene expression of NDUFB2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFB2	ENSG00000090266.8	114.32940	454.12120	-1.98990	16.29410	14.59680	HepG2	PABPC4
NDUFB2	ENSG00000090266.8	1061.39110	632.36510	0.74700	13.83570	12.66910	K562	AGGF1
NDUFB2	ENSG00000090266.8	1155.72900	561.66820	1.04090	11.79370	10.76870	HepG2	AKAP1
NDUFB2	ENSG00000090266.8	510.22200	847.36230	-0.73190	11.80150	10.44610	K562	UPF1
NDUFB2	ENSG00000090266.8	1153.34090	658.01000	0.80950	11.25470	9.81610	K562	AKAP8L
NDUFB2	ENSG00000090266.8	1003.07130	635.82090	0.65760	9.44600	8.37370	K562	RBM15
NDUFB2	ENSG00000090266.8	248.49890	536.34930	-1.10990	11.50830	8.10860	K562	PABPC4
NDUFB2	ENSG00000090266.8	976.22980	537.95030	0.85960	9.16530	8.08320	HepG2	DDX3X
NDUFB2	ENSG00000090266.8	1080.35680	652.52590	0.72730	8.17210	7.28740	K562	PUS1
NDUFB2	ENSG00000090266.8	272.76400	475.50360	-0.80180	8.15120	7.21830	HepG2	SF3B4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 83 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFB2 is not available on ENCORE database.

3 RBPs can affect the splicing of NDUFB2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NDUFB2	ENSG00000090266.8	chr7	+	140401854	140401921	140396791	140396874	140402665	140402810	0.57700	0.00052	0.08856	included	K562	HNRNPA1
SE	NDUFB2	ENSG00000090266.8	chr7	+	140400673	140400759	140396508	140396642	140402665	140402810	-0.13400	0.00068	0.07118	excluded	HepG2	RBFOX2
A5SS	NDUFB2	ENSG00000090266.8	chr7	+	140396787	140396972	140396787	140396874	140402665	140402810	-0.62500	0.00136	0.09759	shorter	K562	FXR1

Showing 1 to 3 of 3 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFB2

General Information

Functions

Localization

Domains (AlphaFold: NDUFB2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFB2 is not avaliable on ENCORE database.

21 proteins are bound to NDUFB2 RNA:

eCLIP assay for NDUFB2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFB2 is not available on ENCORE database.

71 RBPs can affect the gene expression of NDUFB2 :

The Knockdown/knockout RNA-Seq assay for NDUFB2 is not available on ENCORE database.

3 RBPs can affect the splicing of NDUFB2 :

The Knockdown/knockout RNA-Seq assay for NDUFB2 is not avaliable on ENCORE database.