ACAD9

General Information

Gene Name : ACAD9
Gene ID : ENSG00000177646.18
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ACAD9)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ACAD9	ENSG00000177646.18	22.21	27.10	24.66	ENCSR000AEF
HepG2	ACAD9	ENSG00000177646.18	27.43	22.54	24.98	ENCSR985KAT
K562	ACAD9	ENSG00000177646.18	18.66	18.35	18.51	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ACAD9 is not avaliable on ENCORE database.

Proteins bound to RNA

ACAD9 RNA is bound by 14 proteins.

CanvasJS.com

eCLIP assay for ACAD9 is not avaliable on ENCORE database.

14 proteins are bound to ACAD9 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	128600865	128600923	+	intron-Distal	6.86114	32.89154	HepG2	SUGP2
chr3	128599619	128599719	+	intron-Distal	4.90974	23.99427	HepG2	SUGP2
chr3	128600030	128600107	+	intron-Distal	5.36438	22.55177	HepG2	SUGP2
chr3	128601504	128601557	+	intron-Distal	5.23670	19.95199	HepG2	SUGP2
chr3	128601142	128601203	+	intron-Distal	5.05015	18.33311	HepG2	SUGP2
chr3	128600383	128600436	+	intron-Distal	4.16473	17.31112	HepG2	SUGP2
chr3	128601283	128601358	+	intron-Distal	3.49943	15.88499	HepG2	SUGP2
chr3	128614193	128614259	+	3'-UTR,5'-UTR,CDS	4.18486	15.74066	HepG2	PPIG
chr3	128600436	128600476	+	intron-Distal	4.83542	13.90883	HepG2	SUGP2
chr3	128601378	128601429	+	intron-Distal	3.77969	12.60743	HepG2	SUGP2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 49 entries

eCLIP assay for ACAD9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ACAD9 is not available on ENCORE database.
68 RBPs can affect the levels of ACAD9.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ACAD9 is not available on ENCORE database.

68 RBPs can affect the gene expression of ACAD9 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ACAD9	ENSG00000177646.13	405.44210	788.16700	-0.95900	17.51180	16.53730	HepG2	SRFBP1
ACAD9	ENSG00000177646.13	442.51530	879.23640	-0.99050	12.73930	11.61240	K562	AQR
ACAD9	ENSG00000177646.13	849.24850	510.62030	0.73380	11.42220	10.60310	HepG2	SRSF1
ACAD9	ENSG00000177646.13	370.18470	630.92780	-0.76920	11.75610	10.45210	HepG2	HNRNPL
ACAD9	ENSG00000177646.13	318.80490	692.34120	-1.11880	10.60200	9.23330	HepG2	FIP1L1
ACAD9	ENSG00000177646.13	706.63010	458.73570	0.62320	8.29290	7.28440	HepG2	HNRNPU
ACAD9	ENSG00000177646.13	216.57370	446.71640	-1.04450	8.12280	7.11620	HepG2	DDX6
ACAD9	ENSG00000177646.13	465.75340	727.17960	-0.64270	8.17610	7.09850	HepG2	AUH
ACAD9	ENSG00000177646.13	39.02430	132.39050	-1.76240	7.83100	6.28820	HepG2	PABPC1
ACAD9	ENSG00000177646.13	277.95030	459.00330	-0.72370	6.52350	5.72590	HepG2	TAF15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 75 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ACAD9 is not available on ENCORE database.

8 RBPs can affect the splicing of ACAD9 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A5SS	ACAD9	ENSG00000177646.13	chr3	+	128598471	128598860	128598471	128598684	128603495	128603589	0.53700	0.00000	0.00001	longer	HepG2	HNRNPK
A5SS	ACAD9	ENSG00000177646.13	chr3	+	128598471	128598860	128598471	128598684	128603495	128603589	0.41400	0.00001	0.00212	longer	HepG2	MATR3
RI	ACAD9	ENSG00000177646.13	chr3	+	128628186	128628992	128628186	128628264	128628863	128628992	0.28400	0.00001	0.00013	included	HepG2	U2AF1
RI	ACAD9	ENSG00000177646.13	chr3	+	128628186	128628992	128628186	128628264	128628863	128628992	0.42400	0.00004	0.00033	included	K562	AQR
A5SS	ACAD9	ENSG00000177646.13	chr3	+	128621395	128621475	128621395	128621471	128622904	128622975	0.20900	0.00129	0.02318	longer	K562	AQR
RI	ACAD9	ENSG00000177646.13	chr3	+	128628186	128628992	128628186	128628264	128628863	128628992	0.48100	0.00184	0.01509	included	HepG2	U2AF2
RI	ACAD9	ENSG00000177646.13	chr3	+	128628186	128628992	128628186	128628264	128628863	128628992	0.14100	0.00532	0.09179	included	HepG2	SRSF1
SE	ACAD9	ENSG00000177646.13	chr3	+	128603495	128603589	128598453	128598684	128612397	128612499	-0.18900	0.00625	0.08277	excluded	K562	HNRNPC
RI	ACAD9	ENSG00000177646.13	chr3	+	128628186	128628992	128628186	128628264	128628863	128628992	0.16500	0.00703	0.05831	included	HepG2	RBM22

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ACAD9

General Information

Functions

Localization

Domains (AlphaFold: ACAD9)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ACAD9 is not avaliable on ENCORE database.

14 proteins are bound to ACAD9 RNA:

eCLIP assay for ACAD9 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ACAD9 is not available on ENCORE database.

68 RBPs can affect the gene expression of ACAD9 :

The Knockdown/knockout RNA-Seq assay for ACAD9 is not available on ENCORE database.

8 RBPs can affect the splicing of ACAD9 :

The Knockdown/knockout RNA-Seq assay for ACAD9 is not avaliable on ENCORE database.