YME1L1

General Information

Gene Name : YME1L1
Gene ID : ENSG00000136758.18
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: YME1L1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	YME1L1	ENSG00000136758.18	66.43	66.38	66.41	ENCSR000AEF
HepG2	YME1L1	ENSG00000136758.18	39.65	76.89	58.27	ENCSR985KAT
K562	YME1L1	ENSG00000136758.18	85.25	86.10	85.67	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for YME1L1 is not avaliable on ENCORE database.

Proteins bound to RNA

YME1L1 RNA is bound by 31 proteins.

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eCLIP assay for YME1L1 is not avaliable on ENCORE database.

31 proteins are bound to YME1L1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	27399930	27399972	-	3'-UTR,intron-Distal	5.31648	20.44705	K562	PABPC4
chr10	27399756	27399791	-	3'-UTR,intron-Distal	4.83067	20.44705	K562	PABPC4
chr10	27437834	27437913	-	CDS,intron-Distal,intron-Proximal	4.88228	19.71668	K562	IGF2BP1
chr10	27412559	27412632	-	CDS,intron-Distal,intron-Proximal	4.19496	19.29409	K562	U2AF2
chr10	27443137	27443239	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.83620	17.70968	HepG2	DDX3X
chr10	27406506	27406541	-	CDS,intron-Distal	5.93693	16.97934	K562	IGF2BP2
chr10	27406503	27406506	-	CDS,intron-Distal,intron-Proximal	5.76585	14.84169	K562	IGF2BP2
chr10	27411860	27411905	-	CDS,intron-Distal,intron-Proximal	4.33515	14.73918	K562	LIN28B
chr10	27405256	27405274	-	CDS,intron-Distal	5.72833	14.57891	K562	IGF2BP2
chr10	27443177	27443297	-	5'-UTR,intron-Distal,intron-Proximal	3.78429	14.21635	K562	RPS3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 89 entries

eCLIP assay for YME1L1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for YME1L1 is not available on ENCORE database.
63 RBPs can affect the levels of YME1L1.

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The Knockdown/knockout RNA-Seq assay for YME1L1 is not available on ENCORE database.

63 RBPs can affect the gene expression of YME1L1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
YME1L1	ENSG00000136758.14	1435.93860	2701.31210	-0.91170	24.18990	22.98580	HepG2	TIAL1
YME1L1	ENSG00000136758.14	5480.37880	3710.59660	0.56250	19.28530	18.27460	HepG2	SRSF1
YME1L1	ENSG00000136758.14	2982.48300	4154.12540	-0.47800	9.99580	9.14860	HepG2	RBM22
YME1L1	ENSG00000136758.14	2005.86110	3434.44230	-0.77590	10.16230	8.92880	HepG2	G3BP1
YME1L1	ENSG00000136758.14	4322.96410	3402.10390	0.34550	9.40540	8.54910	HepG2	ZNF622
YME1L1	ENSG00000136758.14	2505.11660	4020.87530	-0.68260	8.78230	7.72130	HepG2	DDX3X
YME1L1	ENSG00000136758.14	6095.88280	3488.04120	0.80530	8.57760	7.33820	HepG2	SF3A3
YME1L1	ENSG00000136758.14	5637.74370	3800.55630	0.56880	8.06820	6.78180	K562	PRPF8
YME1L1	ENSG00000136758.14	5576.38540	6620.19710	-0.24750	7.16660	6.04710	K562	NSUN2
YME1L1	ENSG00000136758.14	3931.95140	4970.12280	-0.33800	6.28250	5.43820	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for YME1L1 is not available on ENCORE database.

25 RBPs can affect the splicing of YME1L1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.11100	0.00002	excluded	K562	SF3B4
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.16900	0.00000	excluded	HepG2	U2AF1
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.07100	0.00034	excluded	K562	AKAP8L
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.26400	0.00000	excluded	HepG2	U2AF2
SE	YME1L1	ENSG00000136758.14	chr10	-	27415624	27415741	27412512	27412628	27420787	27420870	-0.08800	0.00002	excluded	K562	AQR
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.11800	0.00000	excluded	K562	AQR
SE	YME1L1	ENSG00000136758.14	chr10	-	27410314	27410377	27409414	27409476	27411769	27411987	-0.10600	0.00000	excluded	K562	AQR
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.11300	0.00000	excluded	K562	PUS1
SE	YME1L1	ENSG00000136758.14	chr10	-	27415624	27415715	27412475	27412628	27420787	27420870	-0.07400	0.00000	excluded	K562	PUS1
SE	YME1L1	ENSG00000136758.14	chr10	-	27431315	27431414	27425204	27425314	27434356	27434519	-0.18700	0.00000	excluded	K562	U2AF1

Showing 1 to 10 of 56 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

YME1L1

General Information

Functions

Localization

Domains (AlphaFold: YME1L1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for YME1L1 is not avaliable on ENCORE database.

31 proteins are bound to YME1L1 RNA:

eCLIP assay for YME1L1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for YME1L1 is not available on ENCORE database.

63 RBPs can affect the gene expression of YME1L1 :

The Knockdown/knockout RNA-Seq assay for YME1L1 is not available on ENCORE database.

25 RBPs can affect the splicing of YME1L1 :

The Knockdown/knockout RNA-Seq assay for YME1L1 is not avaliable on ENCORE database.