TPTEP1

General Information

Gene Name : TPTEP1
Gene ID : ENSG00000100181.22
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TPTEP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TPTEP1	ENSG00000100181.22	0.00	0.00	0.00	ENCSR000AEF
HepG2	TPTEP1	ENSG00000100181.22	0.00	0.00	0.00	ENCSR985KAT
K562	TPTEP1	ENSG00000100181.22	72.55	64.58	68.56	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TPTEP1 is not avaliable on ENCORE database.

Proteins bound to RNA

TPTEP1 RNA is bound by 38 proteins.

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eCLIP assay for TPTEP1 is not avaliable on ENCORE database.

38 proteins are bound to TPTEP1 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	17103477	17103533	+	intron-Distal	4.36767	74.86056	K562	AGGF1
chr22	17083894	17083973	+	intron-Distal	3.74263	37.33232	K562	NONO
chr22	17124653	17124700	+	intron-Distal	7.31364	32.12646	K562	EXOSC5
chr22	17083437	17083497	+	intron-Distal	4.94414	30.66900	K562	NONO
chr22	17124207	17124241	+	intron-Distal	5.34828	29.74079	K562	EXOSC5
chr22	17103477	17103533	+	intron-Distal	5.03146	28.74196	K562	HNRNPL
chr22	17084059	17084085	+	intron-Distal	4.91057	28.43222	K562	HNRNPM
chr22	17124082	17124150	+	intron-Distal	5.80050	25.69084	K562	EXOSC5
chr22	17122911	17122988	+	intron-Distal	6.00627	25.69084	K562	EXOSC5
chr22	17124276	17124344	+	intron-Distal	6.90732	25.38070	K562	EXOSC5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 164 entries

eCLIP assay for TPTEP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TPTEP1 is not available on ENCORE database.
49 RBPs can affect the levels of TPTEP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TPTEP1 is not available on ENCORE database.

49 RBPs can affect the gene expression of TPTEP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TPTEP1	ENSG00000100181.17	15808.89330	24707.71910	-0.64420	27.31820	25.47670	K562	DDX47
TPTEP1	ENSG00000100181.17	66.40390	0.89270	6.21680	17.76760	16.20870	HepG2	TARDBP
TPTEP1	ENSG00000100181.17	28385.51870	20937.31030	0.43900	14.76540	13.56140	K562	AGGF1
TPTEP1	ENSG00000100181.17	30362.69900	21051.75330	0.52830	13.89100	12.55660	K562	RBM15
TPTEP1	ENSG00000100181.17	4200.11150	7016.25070	-0.74030	13.27280	11.62240	K562	PRPF8
TPTEP1	ENSG00000100181.17	4068.77960	7146.04100	-0.81250	12.17170	10.43570	K562	RPS19
TPTEP1	ENSG00000100181.17	17130.24230	11901.50550	0.52530	8.42800	6.57560	K562	TRIM56
TPTEP1	ENSG00000100181.17	14566.39650	10073.80500	0.53190	8.63600	6.54020	K562	SRFBP1
TPTEP1	ENSG00000100181.17	15737.32530	9766.32900	0.68820	7.73780	5.74250	K562	CCAR1
TPTEP1	ENSG00000100181.17	0.00000	22.71110	-99999.99999	6.93020	5.60450	HepG2	LARP4
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 51 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TPTEP1 is not available on ENCORE database.

39 RBPs can affect the splicing of TPTEP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	TPTEP1	ENSG00000100181.17	chr22	+	17128552	17128675	17119468	17119630	17129416	17129720	0.33700	0.00003	included	K562	SRSF1
SE	TPTEP1	ENSG00000100181.17	chr22	+	17128057	17128147	17119468	17119630	17128552	17128675	-0.40200	0.00000	excluded	K562	SRSF1
SE	TPTEP1	ENSG00000100181.17	chr22	+	17133211	17133373	17130819	17131016	17133822	17134695	-0.20400	0.00002	excluded	K562	HNRNPL
SE	TPTEP1	ENSG00000100181.17	chr22	+	17128552	17128675	17119468	17119630	17129416	17129720	-0.20000	0.00000	excluded	K562	HNRNPU
SE	TPTEP1	ENSG00000100181.17	chr22	+	17117929	17117980	17082800	17083105	17119468	17119630	-0.22800	0.00011	excluded	K562	RBM15
RI	TPTEP1	ENSG00000100181.17	chr22	+	17094966	17096001	17094966	17095068	17095588	17096001	-0.15200	0.00045	excluded	K562	GEMIN5
RI	TPTEP1	ENSG00000100181.17	chr22	+	17094966	17096001	17094966	17095068	17095588	17096001	-0.24700	0.00000	excluded	K562	SF3B4
RI	TPTEP1	ENSG00000100181.17	chr22	+	17094966	17096001	17094966	17095068	17095588	17096001	-0.12000	0.00069	excluded	K562	EIF4G2
RI	TPTEP1	ENSG00000100181.17	chr22	+	17094966	17096001	17094966	17095068	17095588	17096001	-0.15800	0.00000	excluded	K562	SF3B1
RI	TPTEP1	ENSG00000100181.17	chr22	+	17094966	17096001	17094966	17095068	17095588	17096001	-0.16500	0.00000	excluded	K562	SRSF1

Showing 1 to 10 of 59 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TPTEP1

General Information

Functions

Localization

Domains (AlphaFold: TPTEP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TPTEP1 is not avaliable on ENCORE database.

38 proteins are bound to TPTEP1 RNA:

eCLIP assay for TPTEP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TPTEP1 is not available on ENCORE database.

49 RBPs can affect the gene expression of TPTEP1 :

The Knockdown/knockout RNA-Seq assay for TPTEP1 is not available on ENCORE database.

39 RBPs can affect the splicing of TPTEP1 :

The Knockdown/knockout RNA-Seq assay for TPTEP1 is not avaliable on ENCORE database.