TPMT

General Information

Gene Name : TPMT
Gene ID : ENSG00000137364.4
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TPMT)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TPMT	ENSG00000137364.4	15.32	12.41	13.87	ENCSR000AEF
HepG2	TPMT	ENSG00000137364.4	12.27	23.07	17.67	ENCSR985KAT
K562	TPMT	ENSG00000137364.4	30.03	34.68	32.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TPMT is not avaliable on ENCORE database.

Proteins bound to RNA

TPMT RNA is bound by 7 proteins.

CanvasJS.com

eCLIP assay for TPMT is not avaliable on ENCORE database.

7 proteins are bound to TPMT RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr6	18149211	18149345	-	CDS,intron-Distal,intron-Proximal	5.06947	13.34504	K562	ZNF622
chr6	18130738	18130856	-	3'-UTR,intron-Distal	4.05301	7.83342	HepG2	SUB1
chr6	18155257	18155304	-	5'-UTR,intron-Distal	5.00063	7.13477	K562	DDX3X
chr6	18130599	18130703	-	3'-UTR,intron-Distal	3.30872	5.47138	HepG2	SUB1
chr6	18149347	18149403	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.23896	5.11648	K562	DDX3X
chr6	18149218	18149405	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.61105	5.11007	HepG2	GRWD1
chr6	18138812	18138889	-	intron-Distal	4.51719	4.17759	HepG2	QKI
chr6	18130072	18130130	-	3'-UTR,intron-Distal	3.51018	3.95400	K562	UPF1
chr6	18133749	18133830	-	intron-Distal	4.24789	3.45799	HepG2	U2AF2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for TPMT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TPMT is not available on ENCORE database.
100 RBPs can affect the levels of TPMT.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TPMT is not available on ENCORE database.

100 RBPs can affect the gene expression of TPMT :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TPMT	ENSG00000137364.4	1783.22230	718.99050	1.31030	48.96850	47.51890	HepG2	SRSF1
TPMT	ENSG00000137364.4	1418.57870	702.01540	1.01480	34.88360	33.50440	HepG2	ZNF622
TPMT	ENSG00000137364.4	1240.98320	2943.75810	-1.24620	29.33150	27.62590	K562	AQR
TPMT	ENSG00000137364.4	518.88370	1133.99580	-1.12790	18.90340	15.63400	K562	SRFBP1
TPMT	ENSG00000137364.4	1386.57540	700.62140	0.98470	14.45710	12.84860	HepG2	CIRBP
TPMT	ENSG00000137364.4	780.82940	1385.50240	-0.82730	12.76000	10.95190	K562	EIF4A3
TPMT	ENSG00000137364.4	1358.55310	1889.55170	-0.47600	11.63820	10.25140	K562	NSUN2
TPMT	ENSG00000137364.4	448.10870	820.51890	-0.87270	10.39580	9.33250	HepG2	BOP1
TPMT	ENSG00000137364.4	907.44210	373.91140	1.27900	11.01500	9.21800	HepG2	PABPC1
TPMT	ENSG00000137364.4	552.95740	881.51750	-0.67280	9.98540	8.78040	HepG2	HNRNPL
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 114 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TPMT is not available on ENCORE database.

6 RBPs can affect the splicing of TPMT :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
A3SS	TPMT	ENSG00000137364.4	chr6	-	18132363	18132539			18132363	18132408	18134034	18134120	0.07100	0.00000	0.00000	longer	K562	AQR
MXE	TPMT	ENSG00000137364.4	chr6	-	18134034	18134120	18139193	18139268	18132363	18132408	18139895	18139948	-0.06300	0.00000	0.00001	2included	HepG2	U2AF2
MXE	TPMT	ENSG00000137364.4	chr6	-	18134034	18134120	18139193	18139311	18132363	18132408	18139895	18139948	0.05700	0.00030	0.00318	1included	K562	AQR
SE	TPMT	ENSG00000137364.4	chr6	-	18133640	18133797			18132363	18132408	18134034	18134120	-0.08000	0.00065	0.09027	excluded	K562	FXR2
MXE	TPMT	ENSG00000137364.4	chr6	-	18132363	18132408	18134034	18134120	18128541	18131011	18139193	18139268	0.10100	0.00082	0.02788	1included	K562	PPIL4
MXE	TPMT	ENSG00000137364.4	chr6	-	18132363	18132408	18134034	18134120	18128541	18131011	18139193	18139268	0.14500	0.00258	0.08117	1included	K562	SAFB
MXE	TPMT	ENSG00000137364.4	chr6	-	18143826	18143959	18148053	18148146	18139895	18139948	18149218	18149402	0.09600	0.00680	0.07565	1included	K562	HNRNPUL1

Showing 1 to 7 of 7 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TPMT

General Information

Functions

Localization

Domains (AlphaFold: TPMT)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TPMT is not avaliable on ENCORE database.

7 proteins are bound to TPMT RNA:

eCLIP assay for TPMT is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TPMT is not available on ENCORE database.

100 RBPs can affect the gene expression of TPMT :

The Knockdown/knockout RNA-Seq assay for TPMT is not available on ENCORE database.

6 RBPs can affect the splicing of TPMT :

The Knockdown/knockout RNA-Seq assay for TPMT is not avaliable on ENCORE database.