SEP15

General Information

Gene Name : SEP15
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SEP15)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SEP15 is not avaliable on ENCORE database.

Proteins bound to RNA

SEP15 RNA is bound by 25 proteins.

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eCLIP assay for SEP15 is not avaliable on ENCORE database.

25 proteins are bound to SEP15 RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	87379708	87379791	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.26836	33.34776	HepG2	DDX3X
chr1	87379708	87379792	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.94447	32.83280	K562	DDX3X
chr1	87379707	87379796	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.14184	28.68162	K562	RPS3
chr1	87368963	87369028	-	CDS,intron-Distal,intron-Proximal	5.40117	23.95342	K562	SND1
chr1	87342404	87342496	-	intron-Distal	6.69749	23.05438	K562	PTBP1
chr1	87368988	87369081	-	CDS,intron-Distal,intron-Proximal	5.04115	15.83575	K562	LIN28B
chr1	87369028	87369082	-	CDS,intron-Distal,intron-Proximal	4.34024	15.03214	K562	SND1
chr1	87328889	87328963	-	3'-UTR,intron-Distal,intron-Proximal	4.75846	13.83696	K562	IGF2BP1
chr1	87369111	87369132	-	CDS,intron-Distal,intron-Proximal	3.42032	13.39743	K562	DDX3X
chr1	87346354	87346394	-	CDS,intron-Distal	4.97969	11.80346	K562	SND1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 62 entries

eCLIP assay for SEP15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SEP15 is not available on ENCORE database.
101 RBPs can affect the levels of SEP15.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SEP15 is not available on ENCORE database.

101 RBPs can affect the gene expression of SEP15 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SEP15	ENSG00000183291.11	560.69140	1600.82840	-1.51350	60.99930	58.22160	HepG2	AKAP8L
SEP15	ENSG00000183291.11	781.41400	2245.33690	-1.52280	49.63920	47.34220	HepG2	HNRNPU
SEP15	ENSG00000183291.11	940.35910	1994.87070	-1.08500	48.44270	45.99450	HepG2	DNAJC2
SEP15	ENSG00000183291.11	959.82020	2369.42010	-1.30370	33.97870	31.95760	K562	HNRNPC
SEP15	ENSG00000183291.11	1512.18670	2776.47530	-0.87660	26.11250	24.62260	HepG2	TAF15
SEP15	ENSG00000183291.11	1931.59080	3163.48330	-0.71170	21.90980	20.66900	HepG2	NELFE
SEP15	ENSG00000183291.11	1406.83090	3207.89930	-1.18920	22.30720	20.61810	HepG2	NCBP2
SEP15	ENSG00000183291.11	1118.38410	2260.27630	-1.01510	21.07410	19.35160	HepG2	HNRNPC
SEP15	ENSG00000183291.11	2245.18930	4325.60040	-0.94610	20.70820	19.27660	K562	AQR
SEP15	ENSG00000183291.11	1860.86660	3076.41620	-0.72530	18.12790	15.94800	K562	HNRNPU
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 130 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SEP15 is not available on ENCORE database.

21 RBPs can affect the splicing of SEP15 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.15000	0.00007	excluded	HepG2	U2AF1
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.11500	0.00000	excluded	HepG2	HNRNPK
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.15400	0.00005	excluded	HepG2	U2AF2
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87368963	87369131	-0.12500	0.00000	excluded	K562	PUS1
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328131	87329288	87346344	87346408	-0.12100	0.00000	excluded	HepG2	HNRNPL
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.31500	0.00000	excluded	K562	HNRNPL
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.13600	0.00005	excluded	HepG2	SF3A3
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328131	87329288	87368963	87369131	-0.05600	0.00006	excluded	K562	UTP18
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328983	87329288	87346344	87346408	-0.08000	0.00001	excluded	K562	TARDBP
SE	SEP15	ENSG00000183291.11	chr1	-	87333735	87333785	87328131	87329288	87368963	87369131	-0.05300	0.00011	excluded	K562	RBM15

Showing 1 to 10 of 26 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SEP15

General Information

Functions

Localization

Domains (AlphaFold: SEP15)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SEP15 is not avaliable on ENCORE database.

25 proteins are bound to SEP15 RNA:

eCLIP assay for SEP15 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SEP15 is not available on ENCORE database.

101 RBPs can affect the gene expression of SEP15 :

The Knockdown/knockout RNA-Seq assay for SEP15 is not available on ENCORE database.

21 RBPs can affect the splicing of SEP15 :

The Knockdown/knockout RNA-Seq assay for SEP15 is not avaliable on ENCORE database.