SELO

General Information

Gene Name : SELO
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: SELO)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for SELO is not avaliable on ENCORE database.

Proteins bound to RNA

SELO RNA is bound by 27 proteins.

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eCLIP assay for SELO is not avaliable on ENCORE database.

27 proteins are bound to SELO RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	50648570	50648626	+	CDS,intron-Proximal	6.65458	41.42376	K562	SF3B4
chr22	50648560	50648570	+	intron-Proximal	6.38944	35.42664	K562	SF3B4
chr22	50647409	50647526	+	intron-Distal	4.90363	18.65014	K562	GTF2F1
chr22	50646904	50646979	+	CDS,intron-Proximal	4.28309	17.12772	HepG2	U2AF2
chr22	50647362	50647472	+	intron-Distal	4.27038	13.92363	HepG2	PRPF4
chr22	50640027	50640156	+	intron-Distal,intron-Proximal	4.44150	13.69009	HepG2	EFTUD2
chr22	50648532	50648612	+	CDS,intron-Proximal	4.11690	13.30158	HepG2	SF3B4
chr22	50644685	50644743	+	intron-Proximal	5.56836	13.25000	HepG2	SF3B4
chr22	50647389	50647514	+	intron-Distal	5.59095	11.94011	K562	EWSR1
chr22	50640023	50640114	+	intron-Proximal	5.21710	11.91893	HepG2	NKRF
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 80 entries

eCLIP assay for SELO is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for SELO is not available on ENCORE database.
83 RBPs can affect the levels of SELO.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for SELO is not available on ENCORE database.

83 RBPs can affect the gene expression of SELO :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
SELO	ENSG00000073169.9	374.38090	138.06410	1.43910	16.01310	14.73930	HepG2	PUF60
SELO	ENSG00000073169.9	189.28090	55.98290	1.75740	14.66100	13.03940	HepG2	PPIL4
SELO	ENSG00000073169.9	90.48180	251.18580	-1.47310	12.93740	11.86030	HepG2	TAF15
SELO	ENSG00000073169.9	176.85560	61.53630	1.52300	11.59420	10.55690	HepG2	TRIM56
SELO	ENSG00000073169.9	579.55840	331.75910	0.80470	10.59290	9.71580	HepG2	SSB
SELO	ENSG00000073169.9	237.53090	90.48810	1.39220	11.13470	9.37330	K562	TIA1
SELO	ENSG00000073169.9	268.63210	132.38460	1.02080	8.82590	7.68530	HepG2	SLBP
SELO	ENSG00000073169.9	346.38980	122.39830	1.50070	8.42240	7.17080	HepG2	XRN2
SELO	ENSG00000073169.9	562.44090	317.69910	0.82390	8.27360	7.08400	K562	AKAP8L
SELO	ENSG00000073169.9	114.72450	227.35970	-0.98680	7.31470	6.49390	HepG2	SRSF9
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 91 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for SELO is not available on ENCORE database.

5 RBPs can affect the splicing of SELO :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	SELO	ENSG00000073169.9	chr22	+	50643347	50643453	50639407	50640019	50644745	50644949	0.65500	0.00000	0.00096	included	K562	XRCC6
SE	SELO	ENSG00000073169.9	chr22	+	50650896	50651113	50649059	50649340	50654145	50654296	0.50700	0.00001	0.00302	included	K562	HNRNPM
SE	SELO	ENSG00000073169.9	chr22	+	50643347	50643453	50639407	50640019	50644745	50644949	-0.22900	0.00014	0.07027	excluded	HepG2	UPF1
SE	SELO	ENSG00000073169.9	chr22	+	50643347	50643453	50639407	50640019	50644745	50644949	0.35300	0.00015	0.00408	included	HepG2	U2AF1
SE	SELO	ENSG00000073169.9	chr22	+	50650896	50651113	50649059	50649340	50654145	50654296	-0.12000	0.00031	0.02666	excluded	HepG2	HNRNPL

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

SELO

General Information

Functions

Localization

Domains (AlphaFold: SELO)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for SELO is not avaliable on ENCORE database.

27 proteins are bound to SELO RNA:

eCLIP assay for SELO is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for SELO is not available on ENCORE database.

83 RBPs can affect the gene expression of SELO :

The Knockdown/knockout RNA-Seq assay for SELO is not available on ENCORE database.

5 RBPs can affect the splicing of SELO :

The Knockdown/knockout RNA-Seq assay for SELO is not avaliable on ENCORE database.