PI4KA

General Information

Gene Name : PI4KA
Gene ID : ENSG00000241973.10
Essential Gene : Yes

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: PI4KA)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	PI4KA	ENSG00000241973.10	17.67	26.99	22.33	ENCSR000AEF
HepG2	PI4KA	ENSG00000241973.10	42.05	22.86	32.45	ENCSR985KAT
K562	PI4KA	ENSG00000241973.10	89.82	85.19	87.50	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for PI4KA is not avaliable on ENCORE database.

Proteins bound to RNA

PI4KA RNA is bound by 47 proteins.

CanvasJS.com

eCLIP assay for PI4KA is not avaliable on ENCORE database.

47 proteins are bound to PI4KA RNA:

Show entries

Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	21212913	21212963	-	5'-UTR,CDS,intron-Distal	7.67099	107.65031	HepG2	XPO5
chr22	21072979	21073035	-	CDS,intron-Distal,intron-Proximal	3.65553	42.16986	K562	DDX24
chr22	21072979	21073018	-	CDS,intron-Distal,intron-Proximal	3.68076	38.49227	K562	UCHL5
chr22	21064980	21065077	-	CDS,intron-Distal,intron-Proximal	3.61697	38.31228	K562	DDX24
chr22	21106032	21106091	-	CDS,intron-Distal,intron-Proximal	4.59872	36.13472	K562	SF3B4
chr22	21064995	21065069	-	CDS,intron-Distal,intron-Proximal	3.13404	32.04253	K562	UCHL5
chr22	21157479	21157537	-	CDS,intron-Distal	6.19216	31.62585	K562	DDX24
chr22	21157537	21157608	-	CDS,intron-Distal	6.78791	29.74797	K562	DDX24
chr22	21167693	21167758	-	CDS,intron-Distal	4.91345	29.59254	K562	DDX24
chr22	21067505	21067532	-	intron-Distal,intron-Proximal	4.98486	28.59010	K562	AQR
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 249 entries

eCLIP assay for PI4KA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for PI4KA is not available on ENCORE database.
68 RBPs can affect the levels of PI4KA.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for PI4KA is not available on ENCORE database.

68 RBPs can affect the gene expression of PI4KA :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
PI4KA	ENSG00000241973.6	1294.27790	2260.83100	-0.80470	24.76080	23.65460	HepG2	SRSF1
PI4KA	ENSG00000241973.6	2288.87460	1131.91520	1.01580	20.57320	19.17210	HepG2	BOP1
PI4KA	ENSG00000241973.6	3816.59730	2253.06980	0.76030	20.42970	18.95580	HepG2	QKI
PI4KA	ENSG00000241973.6	3327.05480	2296.90900	0.53450	18.55110	17.44660	HepG2	ZNF622
PI4KA	ENSG00000241973.6	3530.18450	2394.76410	0.55980	15.12890	13.75000	HepG2	AUH
PI4KA	ENSG00000241973.6	2266.32770	1544.01360	0.55360	14.98990	13.63030	HepG2	ZC3H8
PI4KA	ENSG00000241973.6	5357.54890	8787.71950	-0.71390	13.67580	12.51260	K562	AQR
PI4KA	ENSG00000241973.6	1362.43290	2815.05180	-1.04700	11.27760	9.65560	K562	G3BP2
PI4KA	ENSG00000241973.6	1926.28440	2595.60070	-0.43020	9.71190	8.92950	HepG2	SRFBP1
PI4KA	ENSG00000241973.6	3724.01730	2749.51700	0.43760	9.04160	8.05870	HepG2	ETF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 73 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for PI4KA is not available on ENCORE database.

38 RBPs can affect the splicing of PI4KA :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	PI4KA	ENSG00000241973.6	chr22	-	21098915	21099008	21096895	21097052	21101870	21101990	-0.13400	0.00005	excluded	K562	SRSF7
SE	PI4KA	ENSG00000241973.6	chr22	-	21104192	21104282	21101870	21101990	21105580	21105681	-0.17500	0.00000	excluded	K562	HNRNPU
SE	PI4KA	ENSG00000241973.6	chr22	-	21103226	21103288	21101870	21101990	21104192	21104282	0.08800	0.00020	included	K562	HNRNPK
SE	PI4KA	ENSG00000241973.6	chr22	-	21104192	21104282	21101870	21101990	21105580	21105664	-0.25600	0.00000	excluded	K562	HNRNPK
A3SS	PI4KA	ENSG00000241973.6	chr22	-	21104192	21104355	21104192	21104282	21105580	21105664	0.06600	0.00000	longer	K562	AQR
A3SS	PI4KA	ENSG00000241973.6	chr22	-	21159261	21159491	21159261	21159453	21161649	21161771	0.05200	0.00003	longer	K562	AQR
A3SS	PI4KA	ENSG00000241973.6	chr22	-	21153887	21154081	21153887	21154054	21156260	21156509	0.07600	0.00000	longer	K562	AQR
A3SS	PI4KA	ENSG00000241973.6	chr22	-	21067034	21067283	21067034	21067085	21067568	21067678	-0.17900	0.00124	shorter	K562	PUM2
A5SS	PI4KA	ENSG00000241973.6	chr22	-	21115591	21115674	21115640	21115674	21107433	21107468	0.20200	0.00009	longer	K562	FXR1
RI	PI4KA	ENSG00000241973.6	chr22	-	21066980	21067678	21066980	21067085	21067568	21067678	0.30300	0.00000	included	K562	AKAP8L

Showing 1 to 10 of 63 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

PI4KA

General Information

Functions

Localization

Domains (AlphaFold: PI4KA)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for PI4KA is not avaliable on ENCORE database.

47 proteins are bound to PI4KA RNA:

eCLIP assay for PI4KA is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for PI4KA is not available on ENCORE database.

68 RBPs can affect the gene expression of PI4KA :

The Knockdown/knockout RNA-Seq assay for PI4KA is not available on ENCORE database.

38 RBPs can affect the splicing of PI4KA :

The Knockdown/knockout RNA-Seq assay for PI4KA is not avaliable on ENCORE database.