NDUFA7

General Information

Gene Name : NDUFA7
Gene ID : ENSG00000267855.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NDUFA7)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NDUFA7	ENSG00000267855.5	32.81	116.47	74.64	ENCSR000AEF
HepG2	NDUFA7	ENSG00000267855.5	100.61	53.68	77.14	ENCSR985KAT
K562	NDUFA7	ENSG00000267855.5	152.89	153.55	153.22	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NDUFA7 is not avaliable on ENCORE database.

Proteins bound to RNA

NDUFA7 RNA is bound by 14 proteins.

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eCLIP assay for NDUFA7 is not avaliable on ENCORE database.

14 proteins are bound to NDUFA7 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr19	8373076	8373135	-	CDS,intron-Distal,intron-Proximal	5.07049	54.53500	HepG2	DDX3X
chr19	8373146	8373217	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.25618	48.39007	HepG2	DDX3X
chr19	8373032	8373076	-	CDS,intron-Distal,intron-Proximal	4.19323	32.79480	HepG2	DDX3X
chr19	8373074	8373204	-	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.18234	26.10642	HepG2	RPS3
chr19	8376299	8376432	-	3'-UTR,CDS,intron-Distal	4.95627	21.95606	HepG2	LARP4
chr19	8385774	8385791	-	CDS,intron-Distal,intron-Proximal	3.62777	13.99961	K562	DDX3X
chr19	8386191	8386205	-	CDS,intron-Distal	4.14515	13.18683	K562	DDX3X
chr19	8385745	8385774	-	CDS,intron-Distal	3.03864	13.08534	K562	DDX3X
chr19	8381433	8381482	-	5'-UTR,CDS,intron-Distal	3.65091	11.37584	K562	YBX3
chr19	8386205	8386252	-	5'-UTR,CDS,intron-Distal	3.69053	11.22044	K562	DDX3X
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 34 entries

eCLIP assay for NDUFA7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NDUFA7 is not available on ENCORE database.
107 RBPs can affect the levels of NDUFA7.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NDUFA7 is not available on ENCORE database.

107 RBPs can affect the gene expression of NDUFA7 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NDUFA7	ENSG00000167774.2	345.82780	18.23660	4.24500	46.07000	44.29480	HepG2	AKAP1
NDUFA7	ENSG00000167774.2	134.62790	0.00000	99999.99990	41.73020	38.16890	K562	EIF3H
NDUFA7	ENSG00000167774.2	74.36590	352.53060	-2.24500	26.85570	23.62760	K562	CCDC124
NDUFA7	ENSG00000167774.2	0.00000	148.58540	-99999.99999	21.96980	20.49270	HepG2	CKAP4
NDUFA7	ENSG00000267855.1	164.14840	524.51640	-1.67600	21.30650	19.50220	HepG2	U2AF1
NDUFA7	ENSG00000167774.2	0.00000	137.41760	-99999.99999	21.18920	19.39940	HepG2	DDX19B
NDUFA7	ENSG00000267855.1	1790.12760	892.39720	1.00420	16.88500	15.58490	K562	PUS1
NDUFA7	ENSG00000267855.1	191.59370	448.15030	-1.22590	15.94340	14.27670	HepG2	EIF4G1
NDUFA7	ENSG00000267855.1	361.58090	869.53370	-1.26590	16.36610	13.93920	K562	SF3B1
NDUFA7	ENSG00000167774.2	0.00000	44.44280	-99999.99999	14.94130	13.07010	HepG2	EEF2
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 143 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NDUFA7 is not available on ENCORE database.

25 RBPs can affect the splicing of NDUFA7 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
A3SS	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381551			8381379	8381529	8385740	8385932	0.05300	0.00000	longer	K562	AQR
A3SS	NDUFA7	ENSG00000167774.2	chr19	-	8376295	8376495			8376295	8376479	8381379	8381551	0.10200	0.00000	longer	K562	AQR
A3SS	NDUFA7	ENSG00000167774.2	chr19	-	8385740	8385932			8385740	8385790	8386191	8386263	0.05400	0.00000	longer	K562	AQR
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.20000	0.00001	1included	HepG2	FTO
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.28500	0.00000	1included	K562	UCHL5
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.30900	0.00000	1included	K562	XRN2
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.20400	0.00062	1included	K562	NONO
MXE	NDUFA7	ENSG00000267855.1	chr19	-	8376295	8376479	8381379	8381529	8373651	8373768	8385740	8385790	-0.07600	0.00000	2included	K562	AQR
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.18300	0.00002	1included	K562	SDAD1
MXE	NDUFA7	ENSG00000167774.2	chr19	-	8381379	8381529	8385740	8385790	8376295	8376479	8386191	8386263	0.23700	0.00025	1included	HepG2	DDX55

Showing 1 to 10 of 29 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NDUFA7

General Information

Functions

Localization

Domains (AlphaFold: NDUFA7)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NDUFA7 is not avaliable on ENCORE database.

14 proteins are bound to NDUFA7 RNA:

eCLIP assay for NDUFA7 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NDUFA7 is not available on ENCORE database.

107 RBPs can affect the gene expression of NDUFA7 :

The Knockdown/knockout RNA-Seq assay for NDUFA7 is not available on ENCORE database.

25 RBPs can affect the splicing of NDUFA7 :

The Knockdown/knockout RNA-Seq assay for NDUFA7 is not avaliable on ENCORE database.