MTA3

General Information

Gene Name : MTA3
Gene ID : ENSG00000057935.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTA3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTA3	ENSG00000057935.13	31.71	25.07	28.39	ENCSR000AEF
HepG2	MTA3	ENSG00000057935.13	51.71	71.15	61.43	ENCSR985KAT
K562	MTA3	ENSG00000057935.13	17.48	19.24	18.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTA3 is not avaliable on ENCORE database.

Proteins bound to RNA

MTA3 RNA is bound by 18 proteins.

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eCLIP assay for MTA3 is not avaliable on ENCORE database.

18 proteins are bound to MTA3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	42931359	42931458	+	CDS,intron-Distal	4.45457	20.53678	HepG2	BCLAF1
chr2	42871264	42871385	+	3'-UTR,CDS,intron-Proximal	3.22039	19.90689	HepG2	BCLAF1
chr2	42836667	42836725	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.03128	19.71496	HepG2	BCLAF1
chr2	42931353	42931459	+	CDS,intron-Distal,intron-Proximal	4.06664	17.98460	HepG2	PPIG
chr2	42924914	42924931	+	CDS,intron-Proximal	4.40098	15.99938	HepG2	BCLAF1
chr2	42836597	42836667	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.60254	15.59767	HepG2	BCLAF1
chr2	42922962	42922981	+	CDS,intron-Proximal	4.16209	15.02931	HepG2	BCLAF1
chr2	42867310	42867351	+	3'-UTR,CDS,intron-Distal,intron-Proximal	3.39905	14.99208	HepG2	BCLAF1
chr2	42922932	42922962	+	CDS	4.13585	14.75464	HepG2	BCLAF1
chr2	42886914	42886959	+	3'-UTR,CDS	3.19095	13.41553	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 50 entries

eCLIP assay for MTA3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTA3 is not available on ENCORE database.
85 RBPs can affect the levels of MTA3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.

85 RBPs can affect the gene expression of MTA3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTA3	ENSG00000057935.9	1593.62460	2847.05680	-0.83720	38.50070	36.80710	HepG2	PUM1
MTA3	ENSG00000057935.9	1339.40350	2809.64460	-1.06880	34.21650	31.80990	HepG2	NOL12
MTA3	ENSG00000057935.9	1317.44320	2551.36280	-0.95350	29.78020	28.44270	HepG2	RBM22
MTA3	ENSG00000057935.9	264.62380	744.33690	-1.49200	27.55380	25.33370	K562	SRSF1
MTA3	ENSG00000057935.9	2863.51130	1822.13890	0.65210	17.80540	16.12560	HepG2	PRPF4
MTA3	ENSG00000057935.9	1921.76320	2955.51080	-0.62100	17.14850	15.86730	HepG2	SF3B4
MTA3	ENSG00000057935.9	1317.70650	1987.32270	-0.59280	16.97490	15.58700	HepG2	SMN1
MTA3	ENSG00000057935.9	1717.93790	2648.07170	-0.62430	16.57890	15.22730	HepG2	SRSF5
MTA3	ENSG00000057935.9	1830.57350	2789.80730	-0.60790	16.45270	15.17500	HepG2	PCBP1
MTA3	ENSG00000057935.9	273.48680	619.54650	-1.17970	14.50730	13.22750	K562	HNRNPC
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.

14 RBPs can affect the splicing of MTA3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MTA3	ENSG00000057935.9	chr2	+	42909540	42909729			42886902	42887002	42922904	42922979	-0.07400	0.00000	0.00000	excluded	HepG2	SRSF1
SE	MTA3	ENSG00000057935.9	chr2	+	42808924	42809048			42806246	42806340	42836597	42836724	0.05400	0.00000	0.00002	included	HepG2	HNRNPC
MXE	MTA3	ENSG00000057935.9	chr2	+	42836597	42836724	42867312	42867376	42806246	42806340	42871266	42871384	-0.13300	0.00001	0.00040	2included	HepG2	HNRNPUL1
SE	MTA3	ENSG00000057935.9	chr2	+	42913073	42913233			42909540	42909729	42922904	42922979	0.08800	0.00002	0.00088	included	K562	SRSF1
MXE	MTA3	ENSG00000057935.9	chr2	+	42806246	42806340	42836597	42836724	42797576	42797644	42867312	42867376	-0.15100	0.00006	0.00418	2included	HepG2	XRN2
SE	MTA3	ENSG00000057935.9	chr2	+	42867312	42867376			42836597	42836724	42871266	42871384	-0.05900	0.00019	0.00292	excluded	K562	AQR
SE	MTA3	ENSG00000057935.9	chr2	+	42913073	42913233			42909540	42909729	42922904	42922979	-0.06500	0.00026	0.04921	excluded	K562	EIF3G
MXE	MTA3	ENSG00000057935.9	chr2	+	42806246	42806340	42836597	42836724	42797576	42797644	42867312	42867376	0.13900	0.00068	0.08307	1included	HepG2	DDX52
SE	MTA3	ENSG00000057935.9	chr2	+	42925554	42925634			42924915	42924974	42931336	42931458	-0.18100	0.00071	0.07731	excluded	HepG2	HNRNPUL1
MXE	MTA3	ENSG00000057935.9	chr2	+	42797576	42797644	42806246	42806340	42795656	42795913	42836597	42836724	-0.13600	0.00075	0.04507	2included	K562	UTP18

Showing 1 to 10 of 20 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTA3

General Information

Functions

Localization

Domains (AlphaFold: MTA3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTA3 is not avaliable on ENCORE database.

18 proteins are bound to MTA3 RNA:

eCLIP assay for MTA3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.

85 RBPs can affect the gene expression of MTA3 :

The Knockdown/knockout RNA-Seq assay for MTA3 is not available on ENCORE database.

14 RBPs can affect the splicing of MTA3 :

The Knockdown/knockout RNA-Seq assay for MTA3 is not avaliable on ENCORE database.