| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr10 | 103874583 | 103874660 | - | 5'-UTR,intron-Distal | 4.63648 | 73.32685 | K562 | EIF4G2 |
| chr10 | 103874603 | 103874661 | - | 5'-UTR,intron-Distal | 4.11668 | 65.44491 | K562 | DDX24 |
| chr10 | 103868116 | 103868190 | - | intron-Distal | 3.96550 | 43.90427 | K562 | DDX24 |
| chr10 | 103874594 | 103874676 | - | 5'-UTR,intron-Distal | 4.42606 | 42.60762 | K562 | TARDBP |
| chr10 | 103867453 | 103867563 | - | 3'-UTR,intron-Distal | 3.83235 | 41.96281 | K562 | UPF1 |
| chr10 | 103868032 | 103868078 | - | CDS,intron-Distal | 5.42602 | 40.70684 | K562 | RBM15 |
| chr10 | 103874590 | 103874663 | - | 5'-UTR,intron-Distal | 3.05095 | 33.29623 | K562 | GEMIN5 |
| chr10 | 103869356 | 103869439 | - | CDS,intron-Distal,intron-Proximal | 3.30955 | 32.55966 | K562 | DDX24 |
| chr10 | 103868103 | 103868188 | - | intron-Distal | 3.87471 | 31.60871 | K562 | UCHL5 |
| chr10 | 103870878 | 103870959 | - | CDS,intron-Distal,intron-Proximal | 4.56831 | 29.37838 | K562 | EFTUD2 |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| LDB1 | ENSG00000198728.6 | 2505.69670 | 1359.25050 | 0.88230 | 24.25960 | 21.88390 | K562 | EIF3G | |
| LDB1 | ENSG00000198728.6 | 1410.50830 | 610.37780 | 1.20830 | 21.97930 | 20.18790 | HepG2 | HNRNPK | |
| LDB1 | ENSG00000198728.6 | 1310.78190 | 617.53260 | 1.08570 | 21.16300 | 19.71310 | HepG2 | RPS19 | |
| LDB1 | ENSG00000198728.6 | 2564.47730 | 4176.14440 | -0.70350 | 20.99120 | 19.28460 | K562 | EIF2S2 | |
| LDB1 | ENSG00000198728.6 | 1314.41950 | 776.08130 | 0.76000 | 19.21630 | 17.81350 | HepG2 | CKAP4 | |
| LDB1 | ENSG00000198728.6 | 6770.59210 | 4896.88910 | 0.46730 | 15.50930 | 13.72320 | K562 | WDR43 | |
| LDB1 | ENSG00000198728.6 | 1460.66180 | 626.77260 | 1.22050 | 14.38340 | 12.88360 | HepG2 | EIF4B | |
| LDB1 | ENSG00000198728.6 | 4379.47040 | 6850.70200 | -0.64550 | 11.29190 | 9.63370 | K562 | PUF60 | |
| LDB1 | ENSG00000198728.6 | 1229.89530 | 668.77890 | 0.87880 | 10.19680 | 9.02440 | HepG2 | NCBP2 | |
| LDB1 | ENSG00000198728.6 | 4928.52490 | 3173.58170 | 0.63490 | 10.72300 | 8.57220 | K562 | TRIM56 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A3SS | LDB1 | ENSG00000198728.6 | chr10 | - | 103869356 | 103869587 | 103869356 | 103869440 | 103869677 | 103869800 | 0.08400 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
| A3SS | LDB1 | ENSG00000198728.6 | chr10 | - | 103871190 | 103871339 | 103871190 | 103871293 | 103874162 | 103874703 | 0.07300 | 0.00000 | 0.00000 | longer | K562 | AQR | |||
| SE | LDB1 | ENSG00000198728.6 | chr10 | - | 103871831 | 103871887 | 103871190 | 103871293 | 103879842 | 103880205 | 0.09000 | 0.00017 | 0.08938 | included | K562 | PUM2 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".