HERC2P2

General Information

Gene Name : HERC2P2
Gene ID : ENSG00000276550.4
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: HERC2P2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	HERC2P2	ENSG00000276550.4	11.21	16.94	14.08	ENCSR000AEF
HepG2	HERC2P2	ENSG00000276550.4	29.51	26.46	27.98	ENCSR985KAT
K562	HERC2P2	ENSG00000276550.4	37.16	44.02	40.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for HERC2P2 is not avaliable on ENCORE database.

Proteins bound to RNA

HERC2P2 RNA is bound by 21 proteins.

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eCLIP assay for HERC2P2 is not avaliable on ENCORE database.

21 proteins are bound to HERC2P2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr15	23300124	23300169	-	intron-Distal,intron-Proximal	3.65726	16.36667	K562	DDX24
chr15	23300018	23300124	-	intron-Distal	3.72722	15.72591	K562	DDX24
chr15	23313975	23314047	-	intron-Distal	6.14825	12.78069	K562	EIF4G2
chr15	23308659	23308710	-	intron-Distal,intron-Proximal	4.78077	10.79453	K562	DDX24
chr15	23312225	23312300	-	intron-Distal,intron-Proximal	3.51976	10.46214	K562	ZNF622
chr15	23306753	23306791	-	intron-Distal	5.99473	10.14153	K562	DDX24
chr15	23303804	23303830	-	intron-Distal,intron-Proximal	3.70816	9.87923	K562	DDX24
chr15	23300123	23300189	-	intron-Distal,intron-Proximal	3.93162	9.52799	HepG2	BUD13
chr15	23308658	23308715	-	intron-Distal,intron-Proximal	3.84150	9.43678	K562	BUD13
chr15	23309936	23310016	-	intron-Distal,intron-Proximal	3.00459	9.23929	K562	PRPF8
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 59 entries

eCLIP assay for HERC2P2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for HERC2P2 is not available on ENCORE database.
93 RBPs can affect the levels of HERC2P2.

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The Knockdown/knockout RNA-Seq assay for HERC2P2 is not available on ENCORE database.

93 RBPs can affect the gene expression of HERC2P2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
HERC2P2	ENSG00000140181.10	2433.52220	1365.88050	0.83310	26.50730	24.99740	HepG2	SF3B4
HERC2P2	ENSG00000140181.10	2272.70260	1281.57660	0.82640	21.55220	20.19450	HepG2	TAF15
HERC2P2	ENSG00000140181.10	2051.28470	1016.05850	1.01340	21.88140	19.77640	HepG2	FUBP3
HERC2P2	ENSG00000140181.10	4795.07740	3071.36260	0.64260	20.76300	19.37660	HepG2	ETF1
HERC2P2	ENSG00000140181.10	2836.77340	1272.80450	1.15610	20.39890	18.67490	HepG2	G3BP1
HERC2P2	ENSG00000140181.10	6215.21070	4553.08200	0.44890	20.36600	18.61210	K562	NSUN2
HERC2P2	ENSG00000140181.10	2494.36950	1420.83270	0.81180	19.83400	18.37490	HepG2	QKI
HERC2P2	ENSG00000140181.10	1605.35310	3186.99950	-0.98930	19.80870	17.80020	K562	PRPF8
HERC2P2	ENSG00000140181.10	2253.56770	3935.52690	-0.80430	18.72660	17.07830	K562	PTBP1
HERC2P2	ENSG00000140181.10	2523.09080	1289.28890	0.96850	18.12020	16.48210	HepG2	HNRNPK
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 104 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for HERC2P2 is not available on ENCORE database.

36 RBPs can affect the splicing of HERC2P2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	FDR	is_included	Cell Line	Affected by RBP
SE	HERC2P2	ENSG00000140181.10	chr15	-	23296890	23296978	23295763	23295937	23299022	23299121	0.12700	0.00020	included	K562	MATR3
SE	HERC2P2	ENSG00000140181.10	chr15	-	23296890	23296981	23295763	23295937	23299022	23299121	0.11300	0.00036	included	K562	AKAP8L
SE	HERC2P2	ENSG00000140181.10	chr15	-	23306733	23306791	23303804	23303947	23308563	23308707	-0.21200	0.00031	excluded	K562	RBM15
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285797	0.13900	0.00002	longer	HepG2	SF3A3
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285797	-0.05500	0.00265	shorter	K562	CPSF6
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285752	0.10300	0.00175	longer	K562	RBM22
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285752	0.15600	0.00031	longer	K562	FXR1
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285797	0.09900	0.00055	longer	K562	SF3B4
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285797	0.11900	0.01189	longer	HepG2	UPF1
A3SS	HERC2P2	ENSG00000140181.10	chr15	-	23282280	23283416	23282280	23283153	23285704	23285752	0.22900	0.00003	longer	HepG2	TIAL1

Showing 1 to 10 of 54 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

HERC2P2

General Information

Functions

Localization

Domains (AlphaFold: HERC2P2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for HERC2P2 is not avaliable on ENCORE database.

21 proteins are bound to HERC2P2 RNA:

eCLIP assay for HERC2P2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for HERC2P2 is not available on ENCORE database.

93 RBPs can affect the gene expression of HERC2P2 :

The Knockdown/knockout RNA-Seq assay for HERC2P2 is not available on ENCORE database.

36 RBPs can affect the splicing of HERC2P2 :

The Knockdown/knockout RNA-Seq assay for HERC2P2 is not avaliable on ENCORE database.