FBXO44

General Information

Gene Name : FBXO44
Gene ID : ENSG00000132879.13
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FBXO44)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FBXO44	ENSG00000132879.13	0.70	2.70	1.70	ENCSR000AEF
HepG2	FBXO44	ENSG00000132879.13	19.43	5.41	12.42	ENCSR985KAT
K562	FBXO44	ENSG00000132879.13	7.09	3.98	5.54	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FBXO44 is not avaliable on ENCORE database.

Proteins bound to RNA

FBXO44 RNA is bound by 16 proteins.

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eCLIP assay for FBXO44 is not avaliable on ENCORE database.

16 proteins are bound to FBXO44 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr1	11721490	11721538	+	3'-UTR,intron-Distal	5.05754	32.45850	HepG2	RBFOX2
chr1	11721815	11722100	+	3'-UTR,intron-Distal	4.88096	27.75024	K562	UPF1
chr1	11718527	11718674	+	CDS,intron-Distal,intron-Proximal	4.91290	27.59314	K562	AQR
chr1	11721362	11721450	+	3'-UTR,intron-Proximal	5.07767	17.55185	K562	AQR
chr1	11718416	11718488	+	CDS,intron-Proximal	5.28899	16.24884	HepG2	PRPF8
chr1	11718428	11718465	+	CDS,intron-Proximal	6.61607	15.35700	K562	AQR
chr1	11721629	11721681	+	3'-UTR,intron-Distal	5.04960	14.38116	HepG2	RBFOX2
chr1	11718354	11718423	+	CDS,intron-Proximal	3.45982	13.37061	HepG2	PPIG
chr1	11721821	11721961	+	3'-UTR,intron-Distal	4.70803	13.34636	HepG2	UPF1
chr1	11721589	11721629	+	3'-UTR,intron-Distal	4.33901	13.16423	HepG2	RBFOX2
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 63 entries

eCLIP assay for FBXO44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FBXO44 is not available on ENCORE database.
105 RBPs can affect the levels of FBXO44.

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The Knockdown/knockout RNA-Seq assay for FBXO44 is not available on ENCORE database.

105 RBPs can affect the gene expression of FBXO44 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FBXO44	ENSG00000132879.9	1053.71880	331.82850	1.66690	44.25760	42.70510	HepG2	TIAL1
FBXO44	ENSG00000132879.9	1021.97570	477.71340	1.09700	26.18000	24.54580	K562	AGGF1
FBXO44	ENSG00000132879.9	1179.89180	713.68940	0.72520	14.36680	13.46250	HepG2	SRFBP1
FBXO44	ENSG00000132879.9	1067.94920	487.44080	1.13140	14.29450	12.86570	HepG2	EIF4A3
FBXO44	ENSG00000132879.9	201.19400	419.94600	-1.06160	12.27480	11.09310	K562	FXR1
FBXO44	ENSG00000132879.9	703.46530	321.64870	1.12890	11.27600	9.83270	HepG2	XRN2
FBXO44	ENSG00000132879.9	55.91430	187.18930	-1.74320	10.93460	9.34170	K562	G3BP2
FBXO44	ENSG00000132879.9	594.88380	309.04960	0.94470	10.33620	9.20630	HepG2	HNRNPA1
FBXO44	ENSG00000132879.9	750.98890	475.26810	0.65990	10.53920	9.11860	HepG2	DDX19B
FBXO44	ENSG00000132879.9	786.09590	480.32380	0.71060	9.44930	8.37680	K562	RBM15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 118 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FBXO44 is not available on ENCORE database.

10 RBPs can affect the splicing of FBXO44 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.39100	0.00000	0.00006	excluded	HepG2	RBM22
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.37000	0.00002	0.00055	excluded	HepG2	U2AF1
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	0.35700	0.00002	0.00944	included	K562	SBDS
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.53400	0.00004	0.00441	excluded	K562	EFTUD2
SE	FBXO44	ENSG00000132879.9	chr1	+	11715384	11715756	11714913	11715009	11715862	11716157	0.53900	0.00008	0.02595	included	HepG2	FUBP3
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.44200	0.00019	0.01046	excluded	K562	FXR1
SE	FBXO44	ENSG00000132879.9	chr1	+	11715384	11715756	11714913	11715009	11715862	11716157	-0.45100	0.00033	0.03609	excluded	HepG2	PRPF8
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.30700	0.00034	0.02767	excluded	HepG2	FTO
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.54100	0.00041	0.01882	excluded	K562	PRPF8
SE	FBXO44	ENSG00000132879.9	chr1	+	11718589	11718685	11718323	11718421	11718792	11718928	-0.37400	0.00060	0.04235	excluded	HepG2	SRSF9

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FBXO44

General Information

Functions

Localization

Domains (AlphaFold: FBXO44)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FBXO44 is not avaliable on ENCORE database.

16 proteins are bound to FBXO44 RNA:

eCLIP assay for FBXO44 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FBXO44 is not available on ENCORE database.

105 RBPs can affect the gene expression of FBXO44 :

The Knockdown/knockout RNA-Seq assay for FBXO44 is not available on ENCORE database.

10 RBPs can affect the splicing of FBXO44 :

The Knockdown/knockout RNA-Seq assay for FBXO44 is not avaliable on ENCORE database.