CMC4

General Information

Gene Name : CMC4
Gene ID : ENSG00000182712.15
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: CMC4)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	CMC4	ENSG00000182712.15	7.78	9.92	8.85	ENCSR000AEF
HepG2	CMC4	ENSG00000182712.15	5.63	3.85	4.74	ENCSR985KAT
K562	CMC4	ENSG00000182712.15	9.98	8.32	9.15	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for CMC4 is not avaliable on ENCORE database.

Proteins bound to RNA

CMC4 RNA is bound by 1 proteins.

CanvasJS.com

eCLIP assay for CMC4 is not avaliable on ENCORE database.

1 proteins are bound to CMC4 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chrX	154290031	154290088	-	3'-UTR,intron-Distal	4.12414	4.12025	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 1 of 1 entries

eCLIP assay for CMC4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for CMC4 is not available on ENCORE database.
47 RBPs can affect the levels of CMC4.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for CMC4 is not available on ENCORE database.

47 RBPs can affect the gene expression of CMC4 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
CMC4	ENSG00000182712.11	143.68250	54.12660	1.40840	8.24080	7.23580	HepG2	HNRNPU
CMC4	ENSG00000182712.11	112.63120	37.19680	1.59830	7.04600	5.30200	HepG2	XPO5
CMC4	ENSG00000182712.11	25.69400	77.94720	-1.60110	5.22050	4.56470	HepG2	RBM22
CMC4	ENSG00000182712.11	38.16190	104.22360	-1.44950	5.14570	4.43510	HepG2	SRSF9
CMC4	ENSG00000182712.11	40.02090	115.06530	-1.52360	4.66330	3.86120	HepG2	MATR3
CMC4	ENSG00000182712.11	118.17410	58.54500	1.01320	4.47430	3.61480	HepG2	SLBP
CMC4	ENSG00000182712.11	48.47630	117.89340	-1.28210	4.20290	3.55950	HepG2	PTBP1
CMC4	ENSG00000182712.11	35.55900	92.82140	-1.38420	4.74400	3.41020	HepG2	PCBP2
CMC4	ENSG00000182712.11	71.15120	141.76060	-0.99450	4.40720	3.40710	K562	MTPAP
CMC4	ENSG00000182712.11	43.20950	128.09390	-1.56780	3.88850	3.35160	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 50 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for CMC4 is not available on ENCORE database.

3 RBPs can affect the splicing of CMC4 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	CMC4	ENSG00000182712.11	chrX	-	154293893	154294064	154292240	154292308	154298968	154299637	0.40700	0.00002	0.00093	included	K562	SRSF1
SE	CMC4	ENSG00000182712.11	chrX	-	154294180	154294332	154293893	154294064	154298968	154299637	-0.54100	0.00036	0.00904	excluded	K562	SRSF1
SE	CMC4	ENSG00000182712.11	chrX	-	154293893	154294064	154292240	154292308	154298968	154299637	0.38000	0.00210	0.06988	included	K562	PTBP1
SE	CMC4	ENSG00000182712.11	chrX	-	154293760	154293812	154292240	154292308	154298968	154299637	0.29600	0.00275	0.02854	included	K562	AQR

Showing 1 to 4 of 4 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

CMC4

General Information

Functions

Localization

Domains (AlphaFold: CMC4)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for CMC4 is not avaliable on ENCORE database.

1 proteins are bound to CMC4 RNA:

eCLIP assay for CMC4 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for CMC4 is not available on ENCORE database.

47 RBPs can affect the gene expression of CMC4 :

The Knockdown/knockout RNA-Seq assay for CMC4 is not available on ENCORE database.

3 RBPs can affect the splicing of CMC4 :

The Knockdown/knockout RNA-Seq assay for CMC4 is not avaliable on ENCORE database.