BCL2L13

General Information

Gene Name : BCL2L13
Gene ID : ENSG00000099968.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: BCL2L13)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	BCL2L13	ENSG00000099968.17	18.65	20.84	19.74	ENCSR000AEF
HepG2	BCL2L13	ENSG00000099968.17	7.31	9.16	8.23	ENCSR985KAT
K562	BCL2L13	ENSG00000099968.17	41.41	40.12	40.77	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for BCL2L13 is not avaliable on ENCORE database.

Proteins bound to RNA

BCL2L13 RNA is bound by 13 proteins.

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eCLIP assay for BCL2L13 is not avaliable on ENCORE database.

13 proteins are bound to BCL2L13 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr22	18185138	18185148	+	3'-UTR,5'-UTR,CDS,intron-Distal	6.39798	48.89215	K562	LIN28B
chr22	18185148	18185153	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	6.28661	44.73632	K562	LIN28B
chr22	18209444	18209483	+	3'-UTR,CDS	6.01834	39.06553	K562	LIN28B
chr22	18209441	18209444	+	3'-UTR,CDS,intron-Proximal	6.92005	37.43793	K562	LIN28B
chr22	18185101	18185138	+	3'-UTR,5'-UTR,CDS,intron-Distal	4.91740	31.66190	K562	LIN28B
chr22	18211019	18211102	+	3'-UTR	4.49866	25.68131	K562	PUM2
chr22	18211103	18211162	+	3'-UTR	4.25289	11.65401	K562	UPF1
chr22	18210510	18210558	+	3'-UTR	4.67114	8.85840	K562	UPF1
chr22	18212087	18212126	+	3'-UTR	5.14044	7.35154	K562	UPF1
chr22	18211604	18211643	+	3'-UTR	3.52484	7.25900	K562	FAM120A
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 29 entries

eCLIP assay for BCL2L13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for BCL2L13 is not available on ENCORE database.
91 RBPs can affect the levels of BCL2L13.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for BCL2L13 is not available on ENCORE database.

91 RBPs can affect the gene expression of BCL2L13 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
BCL2L13	ENSG00000099968.13	368.27460	739.06470	-1.00490	18.66890	17.59000	HepG2	SSB
BCL2L13	ENSG00000099968.13	868.45700	433.89450	1.00100	18.91340	17.24880	HepG2	DNAJC21
BCL2L13	ENSG00000099968.13	1455.86980	2548.81990	-0.80790	14.75970	12.38940	K562	PCBP2
BCL2L13	ENSG00000099968.13	731.75920	342.47250	1.09530	13.19600	11.95870	HepG2	HNRNPLL
BCL2L13	ENSG00000099968.13	1024.45510	574.00350	0.83560	13.14490	11.48810	HepG2	RBM15
BCL2L13	ENSG00000099968.13	2821.51570	4084.15000	-0.53360	11.37810	10.19460	K562	RBM15
BCL2L13	ENSG00000099968.13	665.77360	338.98000	0.97370	11.18080	9.84910	HepG2	SF3B1
BCL2L13	ENSG00000099968.13	2640.32280	4192.12190	-0.66700	10.66430	9.64570	K562	PUS1
BCL2L13	ENSG00000099968.13	397.32330	808.07790	-1.02420	10.56960	9.44870	HepG2	DDX6
BCL2L13	ENSG00000099968.13	767.66010	489.02900	0.65040	9.56700	8.53700	HepG2	PUS1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 98 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for BCL2L13 is not available on ENCORE database.

18 RBPs can affect the splicing of BCL2L13 :

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Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
MXE	BCL2L13	ENSG00000099968.13	chr22	+	18138427	18138598	18165979	18166087	18121522	18121652	18171751	18171908	0.15800	0.00000	0.00004	1included	K562	DROSHA
SE	BCL2L13	ENSG00000099968.13	chr22	+	18178906	18178976			18171751	18171908	18209442	18211487	0.31800	0.00001	0.00616	included	K562	SBDS
SE	BCL2L13	ENSG00000099968.13	chr22	+	18138427	18138598			18121529	18121652	18165979	18166087	-0.09700	0.00001	0.00025	excluded	K562	HNRNPC
MXE	BCL2L13	ENSG00000099968.13	chr22	+	18138427	18138598	18165979	18166087	18121522	18121652	18171751	18171908	-0.14500	0.00001	0.00037	2included	K562	U2AF1
MXE	BCL2L13	ENSG00000099968.13	chr22	+	18138427	18138598	18165979	18166087	18121522	18121652	18171751	18171908	-0.13700	0.00001	0.00042	2included	K562	U2AF2
MXE	BCL2L13	ENSG00000099968.13	chr22	+	18138427	18138598	18165979	18166087	18121522	18121652	18171751	18171908	0.16900	0.00003	0.00201	1included	K562	HNRNPUL1
SE	BCL2L13	ENSG00000099968.13	chr22	+	18178906	18178976			18165979	18166087	18185008	18185144	0.37100	0.00006	0.00888	included	HepG2	DDX3X
SE	BCL2L13	ENSG00000099968.13	chr22	+	18178884	18178976			18171751	18171908	18185008	18186499	-0.13400	0.00011	0.02662	excluded	K562	DROSHA
MXE	BCL2L13	ENSG00000099968.13	chr22	+	18171751	18171908	18185008	18185144	18165979	18166087	18209442	18213388	0.05200	0.00015	0.01464	1included	K562	LARP7
SE	BCL2L13	ENSG00000099968.13	chr22	+	18178906	18178976			18171751	18171908	18185008	18185152	0.13800	0.00018	0.00963	included	K562	TARDBP

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

BCL2L13

General Information

Functions

Localization

Domains (AlphaFold: BCL2L13)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for BCL2L13 is not avaliable on ENCORE database.

13 proteins are bound to BCL2L13 RNA:

eCLIP assay for BCL2L13 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for BCL2L13 is not available on ENCORE database.

91 RBPs can affect the gene expression of BCL2L13 :

The Knockdown/knockout RNA-Seq assay for BCL2L13 is not available on ENCORE database.

18 RBPs can affect the splicing of BCL2L13 :

The Knockdown/knockout RNA-Seq assay for BCL2L13 is not avaliable on ENCORE database.