ANK3

General Information

Gene Name : ANK3
Gene ID : ENSG00000151150.21
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ANK3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ANK3	ENSG00000151150.21	0.09	0.16	0.12	ENCSR000AEF
HepG2	ANK3	ENSG00000151150.21	0.04	0.08	0.06	ENCSR985KAT
K562	ANK3	ENSG00000151150.21	17.24	16.44	16.84	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ANK3 is not avaliable on ENCORE database.

Proteins bound to RNA

ANK3 RNA is bound by 5 proteins.

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eCLIP assay for ANK3 is not avaliable on ENCORE database.

5 proteins are bound to ANK3 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr10	61926205	61926307	-	intron-Distal,intron-Proximal	5.71910	9.52888	K562	QKI
chr10	61917602	61917656	-	intron-Distal	4.14856	5.75812	K562	PTBP1
chr10	61822269	61822372	-	intron-Distal	4.15342	4.72162	K562	KHSRP
chr10	61819793	61819863	-	intron-Distal,intron-Proximal	4.39656	4.54401	K562	KHSRP
chr10	61926396	61926561	-	CDS,intron-Distal,intron-Proximal	3.74067	4.10408	K562	KHSRP
chr10	61941086	61941186	-	CDS,intron-Distal,intron-Proximal	4.38707	3.43980	K562	ZNF622
chr10	61889473	61889529	-	intron-Distal	3.95366	3.34609	K562	TARDBP
chr10	62021623	62021706	-	CDS,intron-Distal	3.46308	3.31745	K562	ZNF622
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 8 of 8 entries

eCLIP assay for ANK3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ANK3 is not available on ENCORE database.
103 RBPs can affect the levels of ANK3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ANK3 is not available on ENCORE database.

103 RBPs can affect the gene expression of ANK3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ANK3	ENSG00000151150.16	1623.82360	601.43110	1.43280	56.69870	54.08340	K562	UPF1
ANK3	ENSG00000151150.16	1518.72820	559.71080	1.44000	49.20400	46.45030	K562	SF3A3
ANK3	ENSG00000151150.16	2253.81970	931.03920	1.27540	45.31170	42.13920	K562	PUM2
ANK3	ENSG00000151150.16	1692.95330	704.83040	1.26410	41.97220	38.34560	K562	CPEB4
ANK3	ENSG00000151150.16	1411.31540	562.66660	1.32660	30.19480	27.35040	K562	METAP2
ANK3	ENSG00000151150.16	2072.62520	950.26640	1.12500	30.50200	27.31200	K562	PUM1
ANK3	ENSG00000151150.16	2625.08730	684.75300	1.93860	30.15030	27.05300	K562	UTP3
ANK3	ENSG00000151150.16	1896.22070	743.40260	1.35080	30.19050	26.82470	K562	ABCF1
ANK3	ENSG00000151150.16	774.01310	321.56060	1.26720	20.08970	17.05880	K562	AARS
ANK3	ENSG00000151150.16	1253.70910	616.03560	1.02500	20.18770	16.42270	K562	SLTM
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 105 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ANK3 is not available on ENCORE database.

5 RBPs can affect the splicing of ANK3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ANK3	ENSG00000151150.16	chr10	-	61959886	61959985	61958097	61958295	61962759	61962858	-0.54700	0.00002	0.00086	excluded	K562	U2AF1
SE	ANK3	ENSG00000151150.16	chr10	-	61959886	61959985	61958097	61958295	61962759	61962858	0.27300	0.00002	0.05136	included	K562	CPEB4
SE	ANK3	ENSG00000151150.16	chr10	-	61959886	61959985	61958097	61958295	61962759	61962858	-0.26200	0.00121	0.02000	excluded	K562	PUS1
RI	ANK3	ENSG00000151150.16	chr10	-	61898274	61898845	61898274	61898479	61898721	61898845	-0.64100	0.00121	0.06689	excluded	K562	KHSRP
SE	ANK3	ENSG00000151150.16	chr10	-	61959904	61959985	61958097	61958295	61962759	61962858	-0.44600	0.00464	0.08626	excluded	K562	RBM15

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ANK3

General Information

Functions

Localization

Domains (AlphaFold: ANK3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ANK3 is not avaliable on ENCORE database.

5 proteins are bound to ANK3 RNA:

eCLIP assay for ANK3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ANK3 is not available on ENCORE database.

103 RBPs can affect the gene expression of ANK3 :

The Knockdown/knockout RNA-Seq assay for ANK3 is not available on ENCORE database.

5 RBPs can affect the splicing of ANK3 :

The Knockdown/knockout RNA-Seq assay for ANK3 is not avaliable on ENCORE database.