TRIM32

General Information

Gene Name       : TRIM32
Gene ID             : ENSG00000119401.10
Essential Gene : No

Functions

Localization

Domains (AlphaFold: TRIM32)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878TRIM32ENSG00000119401.107.968.398.18ENCSR000AEF
HepG2TRIM32ENSG00000119401.105.856.226.04ENCSR985KAT
K562TRIM32ENSG00000119401.104.603.894.25ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  
  GeneName    Cell_Line    Method    Exp_ID    Control_ID    Sample_reps    Control_reps    KD%    Status    Project    Note  
TRIM32Ribo-STAMP-293TshRNATRIM32-BGRSLV05-21,TRIM32-BGRSLV05-22NT-BGRSLV05-1,NT-BGRSLV05-2,SubmittedENCORE2


  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for TRIM32 is not avaliable on ENCORE database.



Proteins bound to RNA
  • TRIM32 RNA is bound by 3 proteins.  







eCLIP assay for TRIM32 is not avaliable on ENCORE database.





3 proteins are bound to TRIM32 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr9119449823119449908+intron-Distal4.5105110.29014HepG2FAM120A
chr9119449670119449723+intron-Proximal3.709923.01994HepG2GTF2F1
chr9119449673119449737+intron-Proximal3.321263.51554HepG2PRPF4
chr9119449672119449735+intron-Proximal4.470155.44892HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for TRIM32 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for TRIM32 is not available on ENCORE database.

  • 40 RBPs can affect the levels of TRIM32.  








The Knockdown/knockout RNA-Seq assay for TRIM32 is not available on ENCORE database.





40 RBPs can affect the gene expression of TRIM32 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
TRIM32ENSG00000119401.10499.58300263.447700.9231012.5009011.40800HepG2ACO1
TRIM32ENSG00000119401.10721.30190293.327801.2980014.1677013.06240HepG2AKAP1
TRIM32ENSG00000119401.10464.38600264.706000.810808.387407.14240HepG2AKAP8L
TRIM32ENSG00000119401.10378.57550263.415200.523104.056803.28080HepG2CKAP4
TRIM32ENSG00000119401.10429.11320254.679300.752603.781402.88130HepG2CNOT7
TRIM32ENSG00000119401.10487.93060330.744000.560905.127304.30000HepG2CELF1
TRIM32ENSG00000119401.10379.27520221.571900.775405.601404.67140HepG2DDX21
TRIM32ENSG00000119401.10197.50490262.47420-0.410301.928701.33020HepG2DNAJC21
TRIM32ENSG00000119401.10361.55670249.669800.534102.157501.54780HepG2EIF4B
TRIM32ENSG00000119401.10411.36680294.674300.481202.213401.52090HepG2FIP1L1
TRIM32ENSG00000119401.10197.10230136.715600.527701.999201.32230HepG2FUBP3
TRIM32ENSG00000119401.10439.22700258.733900.763405.264604.33070HepG2FXR1
TRIM32ENSG00000119401.10388.88350240.002100.696204.295403.47620HepG2G3BP1
TRIM32ENSG00000119401.10119.64140296.44580-1.309109.324408.19340HepG2GPKOW
TRIM32ENSG00000119401.10181.97440264.98850-0.542202.258001.67000HepG2HNRNPA1
TRIM32ENSG00000119401.10526.68660368.796100.514002.622501.81470HepG2LARP4
TRIM32ENSG00000119401.10380.09560258.824300.554302.893202.22320HepG2MAGOH
TRIM32ENSG00000119401.10501.74220260.269400.946807.363606.37180HepG2MATR3
TRIM32ENSG00000119401.10382.69440266.397200.522502.595101.98040HepG2NCBP2
TRIM32ENSG00000119401.10140.78770250.83020-0.833204.143003.23280HepG2NSUN2
TRIM32ENSG00000119401.10346.76320244.626000.503303.256602.60760HepG2PCBP1
TRIM32ENSG00000119401.10434.94300248.911400.805107.882307.05500HepG2PTBP1
TRIM32ENSG00000119401.10501.24670357.331000.488204.844104.10410HepG2PUM1
TRIM32ENSG00000119401.10373.11900268.342200.475503.384002.72010HepG2PUS1
TRIM32ENSG00000119401.10399.40170269.587200.567003.756903.04570HepG2QKI
TRIM32ENSG00000119401.10766.83020407.070500.9135013.7752012.79470HepG2RBM22
TRIM32ENSG00000119401.10329.46770244.663900.429202.076801.48720HepG2RBM25
TRIM32ENSG00000119401.10382.82390277.018400.466602.740602.20130HepG2NELFE
TRIM32ENSG00000119401.10253.18730157.036000.689003.622602.92880HepG2RPS19
TRIM32ENSG00000119401.10337.58300221.963800.604802.821402.14040HepG2SF3A3
TRIM32ENSG00000119401.10674.09040459.766100.551906.328305.65490HepG2SRFBP1
TRIM32ENSG00000119401.10458.15120270.500700.760107.201106.52140HepG2SRSF1
TRIM32ENSG00000119401.10444.14880332.361600.418203.078102.42220HepG2SRSF5
TRIM32ENSG00000119401.10284.23200220.063800.369001.838501.37150HepG2SRSF9
TRIM32ENSG00000119401.10475.46700377.971600.331002.421901.83240HepG2SUCLG1
TRIM32ENSG00000119401.10212.02810287.04640-0.437002.467201.92800HepG2TRIM56
TRIM32ENSG00000119401.10425.13970252.097400.753905.108504.26980HepG2U2AF1
TRIM32ENSG00000119401.10251.43180190.049000.403701.851001.33980HepG2UTP3
TRIM32ENSG00000119401.10297.43930220.708700.430402.364501.73770HepG2ZC3H8
TRIM32ENSG00000119401.10482.57730350.671900.460502.358801.81070K562AQR
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for TRIM32 is not available on ENCORE database.






No RBPs affect the alternative splcing events of TRIM32 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for TRIM32 is not avaliable on ENCORE database.