| RBP | Antibody Info | Primary-HepG2 | Secondary-HepG2 | Primary-K562 | Secondary-K562 | Primary-UBERON | Primary-Hela |
|---|
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
|---|---|---|---|---|---|---|---|---|
| chr6 | 111885321 | 111885401 | + | intron-Distal | 4.27650 | 10.56931 | HepG2 | HNRNPL |
| chr6 | 111804996 | 111805065 | + | intron-Distal | 3.48258 | 7.76099 | HepG2 | NKRF |
| chr6 | 111804919 | 111805008 | + | intron-Distal,intron-Proximal | 3.27469 | 6.89356 | HepG2 | CSTF2T |
| chr6 | 111805260 | 111805328 | + | intron-Distal,intron-Proximal | 3.03087 | 6.22789 | HepG2 | PCBP2 |
| chr6 | 111876124 | 111876246 | + | intron-Distal | 3.35321 | 4.98044 | HepG2 | CSTF2 |
| chr6 | 111827831 | 111827896 | + | intron-Distal | 3.48666 | 4.33009 | HepG2 | SUGP2 |
| chr6 | 111816964 | 111817150 | + | intron-Distal | 3.63634 | 4.23286 | HepG2 | QKI |
| chr6 | 111824775 | 111824902 | + | intron-Distal,polyA_site | 3.12967 | 4.05766 | HepG2 | CSTF2 |
| chr6 | 111857570 | 111857617 | + | intron-Distal | 3.34136 | 3.94088 | HepG2 | QKI |
| chr6 | 111805015 | 111805073 | + | intron-Distal | 3.33565 | 3.48399 | HepG2 | CSTF2T |
| Chr | Start | End | Strand | Matched Area | log2(fold change) | -log(p-value) | Cell Line | Binding Protein Name |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) * | -log(pval) ** | -log(padj) ** | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|
| TRAF3IP2-AS1 | ENSG00000231889.3 | 67.32830 | 192.56490 | -1.51610 | 9.07920 | 8.00100 | HepG2 | DDX3X | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 59.88160 | 152.18780 | -1.34570 | 7.48970 | 6.67710 | HepG2 | PTBP1 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 71.00980 | 182.56940 | -1.36240 | 7.44060 | 6.42690 | HepG2 | NCBP2 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 63.96170 | 149.57370 | -1.22560 | 6.83780 | 5.95170 | HepG2 | PCBP1 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 64.39210 | 162.58390 | -1.33620 | 6.95280 | 5.81480 | HepG2 | PABPC4 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 92.21390 | 201.02610 | -1.12430 | 5.28200 | 4.57570 | HepG2 | AKAP1 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 76.10340 | 162.32470 | -1.09290 | 4.31680 | 3.35640 | HepG2 | CNOT7 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 81.18170 | 159.01940 | -0.97000 | 4.05290 | 3.34500 | HepG2 | EIF2S1 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 57.67530 | 113.67510 | -0.97890 | 3.93750 | 3.22750 | HepG2 | PUS1 | |
| TRAF3IP2-AS1 | ENSG00000231889.3 | 89.34430 | 164.48140 | -0.88050 | 3.67850 | 2.91520 | HepG2 | G3BP1 | |
| Gene Name | Gene ID | KDMean | CNMean | log2(fold change) | -log(pval) | -log(padj) | Cell Line | Affected by RBP | Bound by RBP |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".
| Event Type | Gene Name | Gene ID | chr | Strand | ExonStart | ExonEnd | 2ndExonStart | 2ndExonEnd | upstreamES | upstreamEE | downstreamES | downstreamEE | dPSI | p-value | FDR | is_included | Cell Line | Affected by RBP | Bound by RBP |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE | TRAF3IP2-AS1 | ENSG00000231889.3 | chr6 | + | 111805946 | 111806064 | 111804764 | 111804868 | 111895823 | 111896005 | 0.23900 | 0.00082 | 0.08567 | included | HepG2 | PCBP2 |
*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".