TIMM8B

General Information

Gene Name : TIMM8B
Gene ID : ENSG00000150779.11
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TIMM8B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TIMM8B	ENSG00000150779.11	16.64	44.19	30.41	ENCSR000AEF
HepG2	TIMM8B	ENSG00000150779.11	71.52	49.85	60.69	ENCSR985KAT
K562	TIMM8B	ENSG00000150779.11	75.70	64.41	70.06	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TIMM8B is not avaliable on ENCORE database.

Proteins bound to RNA

TIMM8B RNA is bound by 4 proteins.

CanvasJS.com

eCLIP assay for TIMM8B is not avaliable on ENCORE database.

4 proteins are bound to TIMM8B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr11	111957362	111957461	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.17961	31.51626	K562	DDX3X
chr11	111955962	111956143	-	3'-UTR,CDS,intron-Distal	4.08122	8.69423	K562	PUM2
chr11	111955902	111955977	-	3'-UTR,intron-Distal	3.96226	5.80891	HepG2	LARP4
chr11	111957368	111957463	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.77519	5.35746	HepG2	DDX3X
chr11	111956067	111956129	-	3'-UTR,CDS,intron-Distal	3.55326	4.37595	HepG2	LARP4
chr11	111956063	111956130	-	3'-UTR,CDS,intron-Distal	4.38260	4.31428	K562	YBX3
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 6 of 6 entries

eCLIP assay for TIMM8B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for TIMM8B is not available on ENCORE database.
81 RBPs can affect the levels of TIMM8B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.

81 RBPs can affect the gene expression of TIMM8B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
TIMM8B	ENSG00000150779.7	893.18500	370.63160	1.26890	17.69130	16.27250	K562	FXR1
TIMM8B	ENSG00000150779.7	152.44760	465.38350	-1.61010	17.84740	16.23560	HepG2	EIF4A3
TIMM8B	ENSG00000150779.7	888.03900	465.01230	0.93330	14.93310	13.45550	K562	PTBP1
TIMM8B	ENSG00000150779.7	164.10370	438.16390	-1.41690	13.38580	12.15070	HepG2	DDX6
TIMM8B	ENSG00000150779.7	836.53810	440.52180	0.92510	10.21510	8.77400	HepG2	ASCC1
TIMM8B	ENSG00000150779.7	893.15750	472.43240	0.91870	9.16400	8.06990	HepG2	MATR3
TIMM8B	ENSG00000150779.7	378.64360	209.90360	0.85100	8.87280	7.82560	HepG2	SMN1
TIMM8B	ENSG00000150779.7	734.90750	476.06230	0.62630	8.66630	7.66790	HepG2	SUCLG1
TIMM8B	ENSG00000150779.7	440.90620	196.39490	1.16660	8.29050	7.50900	HepG2	TIAL1
TIMM8B	ENSG00000150779.7	793.22480	530.29400	0.58080	7.59350	6.82540	HepG2	SSB
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 93 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.

23 RBPs can affect the splicing of TIMM8B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.24300	0.00000	0.00000	excluded	K562	SRSF1
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	0.26300	0.00000	0.00000	included	K562	AQR
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.09600	0.00000	0.00031	excluded	HepG2	SRSF7
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.16000	0.00000	0.00008	excluded	HepG2	DDX3X
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.17900	0.00000	0.00000	excluded	HepG2	MATR3
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.20800	0.00000	0.00000	excluded	HepG2	SRSF1
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956690	111957034	111955872	111956186	111957363	111957446	0.10600	0.00000	0.00135	included	HepG2	DDX55
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	-0.16700	0.00001	0.00163	excluded	HepG2	TBRG4
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956690	111957034	111955872	111956186	111957363	111957446	0.15400	0.00001	0.08504	included	HepG2	SDAD1
SE	TIMM8B	ENSG00000150779.7	chr11	-	111956701	111957034	111955523	111956186	111957363	111957522	0.12700	0.00001	0.00306	included	HepG2	SUPV3L1

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

TIMM8B

General Information

Functions

Localization

Domains (AlphaFold: TIMM8B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TIMM8B is not avaliable on ENCORE database.

4 proteins are bound to TIMM8B RNA:

eCLIP assay for TIMM8B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.

81 RBPs can affect the gene expression of TIMM8B :

The Knockdown/knockout RNA-Seq assay for TIMM8B is not available on ENCORE database.

23 RBPs can affect the splicing of TIMM8B :

The Knockdown/knockout RNA-Seq assay for TIMM8B is not avaliable on ENCORE database.