PKD1L2

General Information

Gene Name       : PKD1L2
Gene ID             : ENSG00000166473.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: PKD1L2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878PKD1L2ENSG00000166473.170.000.000.00ENCSR000AEF
HepG2PKD1L2ENSG00000166473.173.482.893.19ENCSR985KAT
K562PKD1L2ENSG00000166473.170.010.010.01ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for PKD1L2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • PKD1L2 RNA is bound by 2 proteins.  







eCLIP assay for PKD1L2 is not avaliable on ENCORE database.





2 proteins are bound to PKD1L2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168116417481164243-CDS,intron-Distal4.106213.49332HepG2PPIG
chr168120216781202221-intron-Distal4.946665.18780K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for PKD1L2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for PKD1L2 is not available on ENCORE database.

  • 69 RBPs can affect the levels of PKD1L2.  








The Knockdown/knockout RNA-Seq assay for PKD1L2 is not available on ENCORE database.





69 RBPs can affect the gene expression of PKD1L2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
PKD1L2ENSG00000166473.12326.11040201.022100.697903.702802.50680HepG2AKAP8
PKD1L2ENSG00000166473.12109.62800171.53970-0.645902.477201.82090HepG2AUH
PKD1L2ENSG00000166473.12309.19900171.639500.849104.545603.28080HepG2CCAR1
PKD1L2ENSG00000166473.12220.8983073.913801.5794011.4122010.12340HepG2CPSF6
PKD1L2ENSG00000166473.12252.95150182.191200.473302.917602.15870HepG2DAZAP1
PKD1L2ENSG00000166473.1258.11670112.04620-0.947103.186202.20430HepG2DDX24
PKD1L2ENSG00000166473.12141.5011080.818600.808002.754201.46780HepG2DDX27
PKD1L2ENSG00000166473.12186.0761086.343301.107605.419304.38260HepG2DDX55
PKD1L2ENSG00000166473.12287.8782075.593301.9290016.2990014.96350HepG2DDX6
PKD1L2ENSG00000166473.12250.9278072.622101.7887014.1014012.83130HepG2EIF2S1
PKD1L2ENSG00000166473.12210.5747078.161901.429707.322906.23360HepG2EIF4B
PKD1L2ENSG00000166473.12114.90410179.78640-0.645902.482201.68080HepG2EIF4G1
PKD1L2ENSG00000166473.12128.87380196.98470-0.612102.246001.69510HepG2ETF1
PKD1L2ENSG00000166473.12196.66140345.00000-0.810903.742201.35250HepG2FASTKD1
PKD1L2ENSG00000166473.12138.7548081.021300.776102.596401.92660HepG2FXR1
PKD1L2ENSG00000166473.12156.1135075.122501.055204.608403.75870HepG2G3BP1
PKD1L2ENSG00000166473.12180.8789083.779001.110305.130504.27630HepG2GPKOW
PKD1L2ENSG00000166473.12152.6487076.153901.003103.988103.16370HepG2HNRNPK
PKD1L2ENSG00000166473.12157.88100106.958300.561702.299101.74150HepG2HNRNPU
PKD1L2ENSG00000166473.12223.31710109.255101.031308.390107.18150HepG2ILF2
PKD1L2ENSG00000166473.12216.90160376.75560-0.796603.354202.01570HepG2KHDRBS1
PKD1L2ENSG00000166473.12169.9909081.492201.060604.390403.61230HepG2MATR3
PKD1L2ENSG00000166473.12309.23450180.663100.775306.196305.05880HepG2NOL12
PKD1L2ENSG00000166473.12624.44930361.184900.789704.428103.28940HepG2PABPC1
PKD1L2ENSG00000166473.12143.78940354.35170-1.301208.478605.95830HepG2PNPT1
PKD1L2ENSG00000166473.1270.23920131.57410-0.905503.909303.00510HepG2PRPF4
PKD1L2ENSG00000166473.1264.54130138.62170-1.102904.206502.72010HepG2PRPF6
PKD1L2ENSG00000166473.12311.01820172.472800.850506.377505.52200HepG2PUF60
PKD1L2ENSG00000166473.12309.07520127.259201.280106.795405.71630HepG2RAVER1
PKD1L2ENSG00000166473.12242.29220164.635700.557402.539402.03740HepG2RBM22
PKD1L2ENSG00000166473.1258.5245097.00100-0.729002.054301.46780HepG2RBM25
PKD1L2ENSG00000166473.12140.78440381.66420-1.438809.520706.85390HepG2RBM47
PKD1L2ENSG00000166473.1246.56520124.98820-1.424505.828804.48820HepG2RPS10
PKD1L2ENSG00000166473.12151.25070397.00650-1.392208.260806.90150HepG2RPS3A
PKD1L2ENSG00000166473.12161.61150373.84230-1.209907.057905.01290HepG2SART3
PKD1L2ENSG00000166473.12160.50460376.96550-1.231807.168804.82140HepG2SBDS
PKD1L2ENSG00000166473.1249.81530135.16450-1.440106.423505.37080HepG2SF3A3
PKD1L2ENSG00000166473.12140.8911079.132600.832103.004502.27020HepG2SF3B1
PKD1L2ENSG00000166473.12227.66010129.699800.811603.898402.74380HepG2SMNDC1
PKD1L2ENSG00000166473.12159.1595088.050600.854002.667301.90030HepG2SNRNP70
PKD1L2ENSG00000166473.12491.88970185.937301.4034021.7331020.67570HepG2SRFBP1
PKD1L2ENSG00000166473.1261.64510107.24360-0.798802.488102.03340HepG2SRSF1
PKD1L2ENSG00000166473.12181.5295085.160101.091904.651503.32010HepG2SRSF3
PKD1L2ENSG00000166473.12103.90170170.31140-0.713002.557401.95120HepG2SRSF5
PKD1L2ENSG00000166473.121072.8312087.243003.62010173.77300170.89470HepG2SRSF9
PKD1L2ENSG00000166473.12144.75170345.45690-1.254907.062105.24760HepG2STIP1
PKD1L2ENSG00000166473.12177.25120103.319500.778603.493402.44620HepG2SUPT6H
PKD1L2ENSG00000166473.12206.9115085.971801.267006.903405.91050HepG2SUPV3L1
PKD1L2ENSG00000166473.12244.2852096.377501.3417011.0701010.06660HepG2TAF15
PKD1L2ENSG00000166473.1275.22140214.20220-1.509806.891305.29180HepG2TBRG4
PKD1L2ENSG00000166473.12228.76660104.858001.125309.198308.26220HepG2TRIM56
PKD1L2ENSG00000166473.1247.18000130.90150-1.472206.075405.16140HepG2U2AF1
PKD1L2ENSG00000166473.12195.40730119.869100.704903.711302.92150HepG2UPF1
PKD1L2ENSG00000166473.1257.23870115.73070-1.015703.789603.10600HepG2UTP3
PKD1L2ENSG00000166473.12184.89770355.61680-0.943605.052203.55560HepG2XPO5
PKD1L2ENSG00000166473.1282.28640139.94130-0.766102.607701.58240HepG2XRCC6
PKD1L2ENSG00000166473.1280.29740129.84770-0.693402.583801.93130HepG2ZC3H8
PKD1L2ENSG00000166473.12264.20290131.834701.002808.718307.88710HepG2ZNF622
PKD1L2ENSG00000166473.1229.819801.784104.062905.707904.91800K562AQR
PKD1L2ENSG00000166473.1221.080702.774402.925503.024401.90780K562CNOT7
PKD1L2ENSG00000166473.1225.211704.726102.415302.942601.93870K562CELF1
PKD1L2ENSG00000166473.1227.022502.403303.491004.170203.24570K562GRSF1
PKD1L2ENSG00000166473.1216.646101.383803.588303.595302.36570K562HNRNPA1
PKD1L2ENSG00000166473.1237.407804.392503.090105.220303.88510K562KRR1
PKD1L2ENSG00000166473.1218.043101.396003.692003.736102.80770K562MTPAP
PKD1L2ENSG00000166473.1226.827001.551704.111705.714504.69690K562NSUN2
PKD1L2ENSG00000166473.1223.471604.195302.484002.889102.05510K562PUF60
PKD1L2ENSG00000166473.1221.800704.461002.288802.641101.60070K562PUM1
PKD1L2ENSG00000166473.1223.259404.372302.411202.839801.86720K562PUM2
PKD1L2ENSG00000166473.1219.074601.530203.639802.998702.15290K562SF3A3
PKD1L2ENSG00000166473.1226.130604.893902.416602.975601.96510K562SF3B1
PKD1L2ENSG00000166473.1223.626001.645203.843903.097502.33900K562UPF1
PKD1L2ENSG00000166473.1214.936601.407803.407203.032002.11750K562WDR3
PKD1L2ENSG00000166473.1224.341302.007603.599804.688903.52190K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for PKD1L2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of PKD1L2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for PKD1L2 is not avaliable on ENCORE database.