NME6

General Information

Gene Name : NME6
Gene ID : ENSG00000172113.9
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NME6)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NME6	ENSG00000172113.9	14.17	21.58	17.88	ENCSR000AEF
HepG2	NME6	ENSG00000172113.9	25.68	20.75	23.21	ENCSR985KAT
K562	NME6	ENSG00000172113.9	26.13	28.22	27.17	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NME6 is not avaliable on ENCORE database.

Proteins bound to RNA

NME6 RNA is bound by 4 proteins.

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eCLIP assay for NME6 is not avaliable on ENCORE database.

4 proteins are bound to NME6 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	48342595	48342712	-	intron-Distal	3.75718	6.62272	HepG2	EFTUD2
chr3	48339916	48340016	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.16422	5.07098	K562	DDX3X
chr3	48337537	48337655	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.22346	3.85435	K562	PRPF8
chr3	48342494	48342545	-	intron-Distal	3.81401	3.60940	HepG2	HNRNPC
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for NME6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NME6 is not available on ENCORE database.
30 RBPs can affect the levels of NME6.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NME6 is not available on ENCORE database.

30 RBPs can affect the gene expression of NME6 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NME6	ENSG00000172113.4	439.15340	207.03890	1.08470	11.38110	9.68730	K562	EIF4A3
NME6	ENSG00000172113.4	393.07310	215.31140	0.86830	8.26540	7.29030	K562	FXR1
NME6	ENSG00000172113.4	144.00090	306.97490	-1.09200	7.33850	6.50030	K562	PUS1
NME6	ENSG00000172113.4	500.31270	317.67870	0.65520	6.68260	5.73420	K562	DDX47
NME6	ENSG00000172113.4	549.89730	319.98970	0.78100	6.21570	5.24100	HepG2	MAGOH
NME6	ENSG00000172113.4	167.05620	299.02630	-0.83990	5.04800	4.26870	K562	RBM15
NME6	ENSG00000172113.4	525.29270	317.15370	0.72780	5.08140	4.21770	HepG2	EIF4A3
NME6	ENSG00000172113.4	124.22460	215.81130	-0.79680	4.85990	3.86560	HepG2	PRPF4
NME6	ENSG00000172113.4	129.85090	257.89050	-0.98990	5.08770	3.77010	K562	NAA15
NME6	ENSG00000172113.4	196.84690	297.39990	-0.59530	3.49520	2.87030	K562	AGGF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 31 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NME6 is not available on ENCORE database.

10 RBPs can affect the splicing of NME6 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NME6	ENSG00000172113.4	chr3	-	48337608	48337648			48336564	48336725	48338216	48338319	-0.53500	0.00000	0.00002	excluded	K562	SF3B1
MXE	NME6	ENSG00000172113.4	chr3	-	48337608	48337648	48338216	48338319	48336564	48336725	48339916	48340013	-0.21300	0.00002	0.00847	2included	K562	ZC3H8
SE	NME6	ENSG00000172113.4	chr3	-	48342016	48342124			48339916	48340013	48342842	48342877	-0.58700	0.00008	0.05404	excluded	HepG2	NKRF
SE	NME6	ENSG00000172113.4	chr3	-	48337608	48337648			48336564	48336725	48338216	48338304	-0.36300	0.00008	0.02577	excluded	HepG2	DKC1
MXE	NME6	ENSG00000172113.4	chr3	-	48337608	48337648	48338216	48338319	48336564	48336725	48339916	48340013	0.28000	0.00009	0.00550	1included	HepG2	TAF15
SE	NME6	ENSG00000172113.4	chr3	-	48342016	48342124			48339916	48340013	48342842	48342877	-0.56300	0.00018	0.02053	excluded	HepG2	TBRG4
MXE	NME6	ENSG00000172113.4	chr3	-	48337608	48337648	48338216	48338319	48336564	48336725	48339916	48340013	0.19200	0.00040	0.01109	1included	HepG2	SRSF1
SE	NME6	ENSG00000172113.4	chr3	-	48342066	48342124			48339596	48340013	48342768	48342795	0.15000	0.00080	0.08007	included	HepG2	SSB
MXE	NME6	ENSG00000172113.4	chr3	-	48336564	48336725	48339916	48340013	48334753	48336293	48342785	48342848	-0.28400	0.00428	0.06447	2included	HepG2	U2AF1
MXE	NME6	ENSG00000172113.4	chr3	-	48336564	48336725	48338216	48338319	48335590	48336293	48339916	48340013	-0.17500	0.00874	0.08880	2included	K562	HNRNPUL1

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NME6

General Information

Functions

Localization

Domains (AlphaFold: NME6)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NME6 is not avaliable on ENCORE database.

4 proteins are bound to NME6 RNA:

eCLIP assay for NME6 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NME6 is not available on ENCORE database.

30 RBPs can affect the gene expression of NME6 :

The Knockdown/knockout RNA-Seq assay for NME6 is not available on ENCORE database.

10 RBPs can affect the splicing of NME6 :

The Knockdown/knockout RNA-Seq assay for NME6 is not avaliable on ENCORE database.