NFATC1

General Information

Gene Name       : NFATC1
Gene ID             : ENSG00000131196.17
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NFATC1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NFATC1ENSG00000131196.171.963.212.58ENCSR000AEF
HepG2NFATC1ENSG00000131196.170.250.120.18ENCSR985KAT
K562NFATC1ENSG00000131196.176.964.075.52ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NFATC1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NFATC1 RNA is bound by 9 proteins.  







eCLIP assay for NFATC1 is not avaliable on ENCORE database.





9 proteins are bound to NFATC1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr187717084777170973+CDS,intron-Distal3.662484.25479K562NOLC1
chr187717102977171156+CDS,intron-Distal4.554625.19115K562NOLC1
chr187717793277178021+intron-Distal4.792204.95161K562GTF2F1
chr187716942477169604+intron-Distal7.0350123.60376K562AGGF1
chr187721224677212341+intron-Distal4.018993.30336K562EWSR1
chr187727160777271669+intron-Distal3.358663.12654K562SLTM
chr187718122377181273+intron-Distal4.447664.75882K562SLTM
chr187718245477182509+intron-Distal4.759205.32699K562SLTM
chr187721676077216837+intron-Distal4.188963.52436K562DROSHA
chr187718301377183083+intron-Distal4.491394.93122K562SLTM
chr187717881777178922+intron-Distal4.909645.09502K562SLTM
chr187727187677271954+intron-Distal4.358663.75568K562SLTM
chr187717794277178035+intron-Distal4.880095.76220K562FAM120A
chr187717792077178021+intron-Distal3.441523.40404K562CSTF2T
chr187721833377218401+intron-Distal3.972433.30336K562EWSR1
chr187717791477177990+intron-Distal5.033614.57355K562FTO
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NFATC1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NFATC1 is not available on ENCORE database.

  • 27 RBPs can affect the levels of NFATC1.  








The Knockdown/knockout RNA-Seq assay for NFATC1 is not available on ENCORE database.





27 RBPs can affect the gene expression of NFATC1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NFATC1ENSG00000131196.1325.376100.582705.444405.222104.52040HepG2AKAP1
NFATC1ENSG00000131196.1310.935300.480604.507802.374901.79930HepG2DDX6
NFATC1ENSG00000131196.1332.498501.570104.371303.042102.33790HepG2PUM2
NFATC1ENSG00000131196.13567.14940340.114200.737608.687907.75710K562AGGF1
NFATC1ENSG00000131196.13520.30010373.749900.477203.405702.29060K562AKAP8
NFATC1ENSG00000131196.13605.62850353.908200.775005.320504.39820K562AKAP8L
NFATC1ENSG00000131196.13295.52660207.923500.507102.821401.85150K562BCLAF1
NFATC1ENSG00000131196.13538.31290406.442500.405302.917901.70170K562CCDC124
NFATC1ENSG00000131196.13242.07810157.741000.617803.113101.98530K562CSTF2
NFATC1ENSG00000131196.13463.68980267.606400.792903.059501.75930K562HNRNPA2B1
NFATC1ENSG00000131196.13520.41390404.762400.362502.418901.58340K562HNRNPU
NFATC1ENSG00000131196.13223.16750396.84950-0.830506.307305.11780K562HSPD1
NFATC1ENSG00000131196.13323.60870211.775400.611602.783101.94070K562MAGOH
NFATC1ENSG00000131196.13472.95000359.525300.395502.330601.37190K562MAK16
NFATC1ENSG00000131196.13657.68820420.736700.644406.660505.13120K562MBNL1
NFATC1ENSG00000131196.13426.69770597.78520-0.486402.330001.35820K562PUM1
NFATC1ENSG00000131196.13471.11540350.952000.424702.097301.61190K562PUS1
NFATC1ENSG00000131196.13350.44850194.842700.846803.968401.64310K562RBFOX2
NFATC1ENSG00000131196.13566.71010341.972900.728607.925406.95330K562RBM15
NFATC1ENSG00000131196.13243.01510149.221400.703502.895101.86920K562RPS3
NFATC1ENSG00000131196.13370.83500538.85970-0.539104.879503.82260K562SF3A3
NFATC1ENSG00000131196.13454.75870260.761500.802302.874401.53570K562SFPQ
NFATC1ENSG00000131196.13693.31250552.073100.328502.760301.82500K562SRPK2
NFATC1ENSG00000131196.13309.04490201.740900.615203.629102.82580K562SRSF1
NFATC1ENSG00000131196.13264.98770144.010900.879604.996603.50890K562SRSF4
NFATC1ENSG00000131196.13293.84070196.918400.577302.339001.59430K562TIA1
NFATC1ENSG00000131196.13459.70960579.04290-0.332902.548501.85780K562UPF1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NFATC1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NFATC1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NFATC1 is not avaliable on ENCORE database.