MTIF3

General Information

Gene Name : MTIF3
Gene ID : ENSG00000122033.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: MTIF3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	MTIF3	ENSG00000122033.14	47.39	46.27	46.83	ENCSR000AEF
HepG2	MTIF3	ENSG00000122033.14	20.98	39.19	30.09	ENCSR985KAT
K562	MTIF3	ENSG00000122033.14	41.97	49.49	45.73	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for MTIF3 is not avaliable on ENCORE database.

Proteins bound to RNA

MTIF3 RNA is bound by 3 proteins.

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eCLIP assay for MTIF3 is not avaliable on ENCORE database.

3 proteins are bound to MTIF3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	28009927	28009985	-	CDS,intron-Distal	4.27268	9.00050	K562	YBX3
chr13	28009985	28010018	-	CDS,intron-Distal	3.51169	7.86995	K562	YBX3
chr13	28014203	28014275	-	CDS,intron-Distal,intron-Proximal	3.08585	3.70975	K562	UCHL5
chr13	28024186	28024388	-	5'-UTR,intron-Distal,intron-Proximal	3.72370	3.07008	K562	NONO
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 4 of 4 entries

eCLIP assay for MTIF3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for MTIF3 is not available on ENCORE database.
33 RBPs can affect the levels of MTIF3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.

33 RBPs can affect the gene expression of MTIF3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
MTIF3	ENSG00000122033.10	170.38700	482.93770	-1.50300	14.70590	13.07810	HepG2	SF3A3
MTIF3	ENSG00000122033.10	307.15560	519.05930	-0.75690	8.22210	6.87390	K562	SF3A3
MTIF3	ENSG00000122033.10	239.89870	462.07180	-0.94570	7.54340	6.52210	HepG2	NCBP2
MTIF3	ENSG00000122033.10	550.17220	378.73310	0.53860	5.36540	4.69800	HepG2	SSB
MTIF3	ENSG00000122033.10	658.28810	443.14650	0.57080	4.59150	3.84360	HepG2	BOP1
MTIF3	ENSG00000122033.10	606.85210	399.96440	0.60140	4.36620	3.40700	HepG2	CIRBP
MTIF3	ENSG00000122033.10	342.31210	471.03880	-0.46050	4.00420	3.37920	HepG2	ZNF622
MTIF3	ENSG00000122033.10	543.82800	386.20910	0.49370	3.78450	3.20340	HepG2	RBM22
MTIF3	ENSG00000122033.10	300.24670	440.48430	-0.55290	3.61610	2.94500	K562	HNRNPC
MTIF3	ENSG00000122033.10	662.49490	478.13080	0.47040	3.71140	2.93900	HepG2	RPLP0
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 35 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.

12 RBPs can affect the splicing of MTIF3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.32200	0.00000	0.00001	included	K562	HNRNPU
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.35700	0.00000	0.00000	included	HepG2	HNRNPU
SE	MTIF3	ENSG00000122033.10	chr13	-	28011252	28011410			28009775	28010030	28019224	28019293	-0.26600	0.00000	0.00003	excluded	K562	HNRNPC
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.17600	0.00005	0.02810	included	HepG2	XPO5
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.09600	0.00006	0.02206	included	HepG2	BCLAF1
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.14600	0.00007	0.00307	included	HepG2	HNRNPK
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.08800	0.00008	0.02378	included	HepG2	DDX55
SE	MTIF3	ENSG00000122033.10	chr13	-	28014125	28014586			28009779	28010030	28019224	28019293	-0.16300	0.00024	0.00503	excluded	K562	PUS1
SE	MTIF3	ENSG00000122033.10	chr13	-	28015153	28015214			28014125	28014586	28019224	28019293	0.15600	0.00046	0.09094	included	HepG2	ILF3
MXE	MTIF3	ENSG00000122033.10	chr13	-	28011252	28011410	28014125	28014586	28009775	28010030	28019224	28019293	-0.17100	0.00051	0.02058	2included	HepG2	XRN2

Showing 1 to 10 of 14 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

MTIF3

General Information

Functions

Localization

Domains (AlphaFold: MTIF3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for MTIF3 is not avaliable on ENCORE database.

3 proteins are bound to MTIF3 RNA:

eCLIP assay for MTIF3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.

33 RBPs can affect the gene expression of MTIF3 :

The Knockdown/knockout RNA-Seq assay for MTIF3 is not available on ENCORE database.

12 RBPs can affect the splicing of MTIF3 :

The Knockdown/knockout RNA-Seq assay for MTIF3 is not avaliable on ENCORE database.