GPALPP1

General Information

Gene Name : GPALPP1
Gene ID : ENSG00000133114.17
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: GPALPP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	GPALPP1	ENSG00000133114.17	18.09	21.68	19.88	ENCSR000AEF
HepG2	GPALPP1	ENSG00000133114.17	13.76	16.61	15.18	ENCSR985KAT
K562	GPALPP1	ENSG00000133114.17	12.30	12.41	12.36	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for GPALPP1 is not avaliable on ENCORE database.

Proteins bound to RNA

GPALPP1 RNA is bound by 5 proteins.

CanvasJS.com

eCLIP assay for GPALPP1 is not avaliable on ENCORE database.

5 proteins are bound to GPALPP1 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr13	45589581	45589704	+	CDS	5.22830	7.73487	HepG2	BCLAF1
chr13	45580350	45580439	+	5'-UTR,CDS,intron-Proximal	5.04232	7.04013	HepG2	BCLAF1
chr13	45582926	45583003	+	5'-UTR,CDS,intron-Proximal	4.93844	6.58593	HepG2	BCLAF1
chr13	45601916	45602067	+	CDS,intron-Proximal	3.10962	5.00905	HepG2	BCLAF1
chr13	45604779	45604838	+	3'-UTR,intron-Distal,intron-Proximal	3.85334	4.36393	K562	AKAP1
chr13	45604417	45604513	+	3'-UTR,intron-Distal	4.27609	3.81568	K562	FAM120A
chr13	45578519	45578568	+	CDS	4.11184	3.45943	HepG2	BCLAF1
chr13	45601588	45601646	+	intron-Distal	4.04037	3.35169	HepG2	U2AF2
chr13	45589102	45589172	+	5'-UTR,CDS	3.96330	3.32022	K562	UCHL5
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 9 of 9 entries

eCLIP assay for GPALPP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for GPALPP1 is not available on ENCORE database.
55 RBPs can affect the levels of GPALPP1.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for GPALPP1 is not available on ENCORE database.

55 RBPs can affect the gene expression of GPALPP1 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
GPALPP1	ENSG00000133114.13	344.59890	702.02280	-1.02660	18.59150	17.51360	HepG2	SSB
GPALPP1	ENSG00000133114.13	313.70930	716.47420	-1.19150	13.02550	11.73080	HepG2	MATR3
GPALPP1	ENSG00000133114.13	389.74890	715.87750	-0.87720	12.53980	11.59810	HepG2	RBM22
GPALPP1	ENSG00000133114.13	356.51820	687.32130	-0.94700	7.27150	6.18530	HepG2	EIF4B
GPALPP1	ENSG00000133114.13	419.28670	641.69120	-0.61390	6.84940	6.01400	K562	AGGF1
GPALPP1	ENSG00000133114.13	391.62080	667.69690	-0.76970	6.52450	5.48890	K562	AKAP8L
GPALPP1	ENSG00000133114.13	424.60520	645.19940	-0.60360	6.16410	5.30500	K562	RBM15
GPALPP1	ENSG00000133114.13	231.23100	387.40000	-0.74450	5.73410	4.41930	HepG2	DDX24
GPALPP1	ENSG00000133114.13	446.87490	629.04780	-0.49330	5.06300	4.36940	HepG2	PTBP1
GPALPP1	ENSG00000133114.13	488.91080	683.61680	-0.48360	4.82330	4.24290	HepG2	SRSF1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 66 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for GPALPP1 is not available on ENCORE database.

4 RBPs can affect the splicing of GPALPP1 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	GPALPP1	ENSG00000133114.13	chr13	+	45583106	45583135	45582929	45583014	45589086	45589218	0.06300	0.00001	0.00582	included	K562	LARP4
A5SS	GPALPP1	ENSG00000133114.13	chr13	+	45582929	45583135	45582929	45583014	45589086	45589218	0.07000	0.00004	0.04633	longer	HepG2	SUB1
A3SS	GPALPP1	ENSG00000133114.13	chr13	+	45589066	45589218	45589086	45589218	45582929	45583014	0.07400	0.00018	0.00150	longer	K562	AQR
A5SS	GPALPP1	ENSG00000133114.13	chr13	+	45582893	45583135	45582893	45583014	45589086	45589218	0.05800	0.00056	0.01144	longer	K562	AQR
SE	GPALPP1	ENSG00000133114.13	chr13	+	45603373	45606242	45601919	45602138	45607370	45607737	-0.40100	0.00533	0.07965	excluded	K562	SRSF1

Showing 1 to 5 of 5 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

GPALPP1

General Information

Functions

Localization

Domains (AlphaFold: GPALPP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for GPALPP1 is not avaliable on ENCORE database.

5 proteins are bound to GPALPP1 RNA:

eCLIP assay for GPALPP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for GPALPP1 is not available on ENCORE database.

55 RBPs can affect the gene expression of GPALPP1 :

The Knockdown/knockout RNA-Seq assay for GPALPP1 is not available on ENCORE database.

4 RBPs can affect the splicing of GPALPP1 :

The Knockdown/knockout RNA-Seq assay for GPALPP1 is not avaliable on ENCORE database.