FRG1B

General Information

Gene Name : FRG1B
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FRG1B)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FRG1B is not avaliable on ENCORE database.

Proteins bound to RNA

FRG1B RNA is bound by 12 proteins.

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eCLIP assay for FRG1B is not avaliable on ENCORE database.

12 proteins are bound to FRG1B RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr20	29623148	29623222	+	3'-UTR,CDS	5.67807	22.72631	HepG2	BCLAF1
chr20	29612124	29612191	+	intron-Proximal	4.12715	11.20412	K562	RBM15
chr20	29632668	29632730	+	CDS,intron-Proximal	3.91554	10.78406	HepG2	BCLAF1
chr20	29625905	29625958	+	CDS	5.54317	9.78817	HepG2	BCLAF1
chr20	29623131	29623205	+	3'-UTR,CDS	3.24582	9.54151	K562	ZNF622
chr20	29611944	29612044	+	5'-UTR	3.41247	9.47203	HepG2	GRWD1
chr20	29612224	29612299	+	intron-Distal,intron-Proximal	3.46057	9.36564	K562	RBM15
chr20	29632626	29632665	+	CDS	4.27650	7.82199	HepG2	BCLAF1
chr20	29625989	29626064	+	intron-Proximal	4.53016	7.53589	K562	AQR
chr20	29625869	29625905	+	CDS,intron-Proximal	3.25939	7.43909	HepG2	BCLAF1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 27 entries

eCLIP assay for FRG1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FRG1B is not available on ENCORE database.
32 RBPs can affect the levels of FRG1B.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for FRG1B is not available on ENCORE database.

32 RBPs can affect the gene expression of FRG1B :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FRG1B	ENSG00000149531.10	449.16600	223.04060	1.00980	8.73360	7.61190	HepG2	U2AF1
FRG1B	ENSG00000149531.10	704.29940	333.76380	1.07730	7.78520	5.79480	K562	U2AF1
FRG1B	ENSG00000149531.10	211.17110	356.48150	-0.75540	5.46650	4.47880	K562	SRSF1
FRG1B	ENSG00000149531.10	299.90120	188.54610	0.66950	4.81940	3.97410	HepG2	ZC3H8
FRG1B	ENSG00000149531.10	232.65330	363.64640	-0.64440	4.76190	3.91270	K562	PTBP1
FRG1B	ENSG00000149531.10	491.37770	355.11720	0.46840	3.91090	3.21690	HepG2	ETF1
FRG1B	ENSG00000149531.10	542.24240	344.25210	0.65540	4.06720	3.16840	K562	G3BP2
FRG1B	ENSG00000149531.10	186.06270	285.73580	-0.61890	3.94870	3.00550	K562	EIF3G
FRG1B	ENSG00000149531.10	202.61050	319.69790	-0.65800	3.48550	2.81810	K562	FXR1
FRG1B	ENSG00000149531.10	588.61220	423.21360	0.47580	3.58620	2.69390	K562	CPSF6
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 35 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FRG1B is not available on ENCORE database.

21 RBPs can affect the splicing of FRG1B :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FRG1B	ENSG00000149531.10	chr20	+	29612961	29613061	29612260	29612397	29614260	29614327	-0.49200	0.00000	0.00000	excluded	HepG2	U2AF2
SE	FRG1B	ENSG00000149531.10	chr20	+	29630698	29630774	29628226	29628331	29631537	29631927	0.13700	0.00000	0.00004	included	HepG2	IGF2BP3
A3SS	FRG1B	ENSG00000149531.10	chr20	+	29632595	29632721	29632610	29632721	29631537	29631629	0.08200	0.00000	0.00001	longer	K562	AQR
SE	FRG1B	ENSG00000149531.10	chr20	+	29614260	29614327	29612260	29612397	29623128	29623254	0.05600	0.00001	0.00561	included	K562	PUM1
SE	FRG1B	ENSG00000149531.10	chr20	+	29612961	29613061	29612260	29612397	29614260	29614327	0.30400	0.00001	0.00368	included	K562	FMR1
SE	FRG1B	ENSG00000149531.10	chr20	+	29624042	29624092	29623128	29623254	29625872	29625984	0.18600	0.00001	0.00030	included	HepG2	U2AF2
SE	FRG1B	ENSG00000149531.10	chr20	+	29630698	29630774	29628226	29628331	29631537	29631927	0.09100	0.00001	0.00105	included	HepG2	AKAP1
SE	FRG1B	ENSG00000149531.10	chr20	+	29612961	29613061	29612260	29612397	29614260	29614327	-0.30700	0.00002	0.00070	excluded	HepG2	U2AF1
SE	FRG1B	ENSG00000149531.10	chr20	+	29630698	29630774	29628226	29628331	29631537	29631927	0.10800	0.00003	0.00128	included	HepG2	HNRNPK
SE	FRG1B	ENSG00000149531.10	chr20	+	29612961	29613061	29612260	29612397	29614260	29614327	-0.28700	0.00003	0.00237	excluded	K562	FXR1

Showing 1 to 10 of 25 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FRG1B

General Information

Functions

Localization

Domains (AlphaFold: FRG1B)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FRG1B is not avaliable on ENCORE database.

12 proteins are bound to FRG1B RNA:

eCLIP assay for FRG1B is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FRG1B is not available on ENCORE database.

32 RBPs can affect the gene expression of FRG1B :

The Knockdown/knockout RNA-Seq assay for FRG1B is not available on ENCORE database.

21 RBPs can affect the splicing of FRG1B :

The Knockdown/knockout RNA-Seq assay for FRG1B is not avaliable on ENCORE database.