FBXL20

General Information

Gene Name : FBXL20
Gene ID : ENSG00000108306.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: FBXL20)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	FBXL20	ENSG00000108306.12	3.12	2.47	2.79	ENCSR000AEF
HepG2	FBXL20	ENSG00000108306.12	4.61	6.47	5.54	ENCSR985KAT
K562	FBXL20	ENSG00000108306.12	4.50	4.23	4.37	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for FBXL20 is not avaliable on ENCORE database.

Proteins bound to RNA

FBXL20 RNA is bound by 22 proteins.

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eCLIP assay for FBXL20 is not avaliable on ENCORE database.

22 proteins are bound to FBXL20 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	37415489	37415554	-	3'-UTR,intron-Distal	3.60935	22.25300	K562	UPF1
chr17	37415621	37415711	-	intron-Distal	4.31589	19.42884	K562	UPF1
chr17	37417307	37417366	-	3'-UTR,intron-Distal	3.87685	11.25148	K562	UPF1
chr17	37459834	37459879	-	CDS,intron-Distal,intron-Proximal	4.69666	11.12920	HepG2	PPIG
chr17	37416381	37416418	-	intron-Distal	4.29370	10.12876	K562	UPF1
chr17	37416418	37416455	-	intron-Distal	3.72443	9.72842	K562	UPF1
chr17	37417204	37417256	-	3'-UTR,intron-Distal	3.98572	8.99604	K562	UPF1
chr17	37416474	37416515	-	intron-Distal	4.26425	8.71030	K562	UPF1
chr17	37416921	37416972	-	3'-UTR,intron-Distal	3.90231	8.37857	K562	UPF1
chr17	37427047	37427108	-	CDS,intron-Distal,intron-Proximal	5.77444	8.27639	K562	DDX24
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 51 entries

eCLIP assay for FBXL20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for FBXL20 is not available on ENCORE database.
45 RBPs can affect the levels of FBXL20.

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The Knockdown/knockout RNA-Seq assay for FBXL20 is not available on ENCORE database.

45 RBPs can affect the gene expression of FBXL20 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
FBXL20	ENSG00000108306.7	249.15330	476.93460	-0.93680	10.56940	9.33030	K562	PTBP1
FBXL20	ENSG00000108306.7	229.42590	473.21080	-1.04450	10.62920	9.08910	K562	TARDBP
FBXL20	ENSG00000108306.7	1031.59330	642.37170	0.68330	9.95220	8.96110	K562	AGGF1
FBXL20	ENSG00000108306.7	249.70060	467.54210	-0.90490	8.96410	7.70120	K562	SRSF1
FBXL20	ENSG00000108306.7	273.31360	489.92470	-0.84200	8.69230	6.95840	K562	MATR3
FBXL20	ENSG00000108306.7	138.42220	255.79380	-0.88590	6.37080	5.18020	K562	EIF3G
FBXL20	ENSG00000108306.7	693.00000	490.44250	0.49870	5.38660	4.75100	HepG2	SRFBP1
FBXL20	ENSG00000108306.7	308.49400	490.90320	-0.67020	5.88220	4.64190	K562	MAGOH
FBXL20	ENSG00000108306.7	499.27470	326.51730	0.61260	5.04790	3.84910	K562	WDR3
FBXL20	ENSG00000108306.7	466.29120	322.18950	0.53320	4.28960	3.61490	HepG2	TAF15
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 46 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for FBXL20 is not available on ENCORE database.

9 RBPs can affect the splicing of FBXL20 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438981	37439108	37453379	37453448	-0.47600	0.00000	0.00003	excluded	K562	PUS1
SE	FBXL20	ENSG00000108306.7	chr17	-	37459280	37459464			37457253	37457328	37459837	37459892	0.35800	0.00000	0.00013	included	K562	HNRNPL
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438981	37439108	37453379	37453448	-0.37900	0.00000	0.00000	excluded	K562	AGGF1
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438885	37439108	37453379	37453448	-0.36800	0.00001	0.00054	excluded	K562	UTP18
SE	FBXL20	ENSG00000108306.7	chr17	-	37459280	37459464			37457253	37457328	37459837	37459892	0.48900	0.00025	0.02233	included	HepG2	HNRNPL
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438981	37439108	37453379	37453448	-0.33400	0.00069	0.01670	excluded	K562	U2AF1
MXE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826	37453379	37453448	37438981	37439108	37455242	37455337	0.19900	0.00092	0.03497	1included	K562	AGGF1
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438981	37439108	37453379	37453448	-0.44600	0.00106	0.04498	excluded	HepG2	HNRNPU
SE	FBXL20	ENSG00000108306.7	chr17	-	37457253	37457328			37455242	37455337	37459837	37459892	0.06300	0.00146	0.08404	included	K562	HNRNPUL1
SE	FBXL20	ENSG00000108306.7	chr17	-	37441730	37441826			37438981	37439108	37453379	37453448	-0.19300	0.00215	0.04839	excluded	K562	RBM15

Showing 1 to 10 of 11 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

FBXL20

General Information

Functions

Localization

Domains (AlphaFold: FBXL20)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for FBXL20 is not avaliable on ENCORE database.

22 proteins are bound to FBXL20 RNA:

eCLIP assay for FBXL20 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for FBXL20 is not available on ENCORE database.

45 RBPs can affect the gene expression of FBXL20 :

The Knockdown/knockout RNA-Seq assay for FBXL20 is not available on ENCORE database.

9 RBPs can affect the splicing of FBXL20 :

The Knockdown/knockout RNA-Seq assay for FBXL20 is not avaliable on ENCORE database.