ASB3

General Information

Gene Name : ASB3
Gene ID : ENSG00000115239.21
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ASB3)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ASB3	ENSG00000115239.21	14.10	11.67	12.88	ENCSR000AEF
HepG2	ASB3	ENSG00000115239.21	14.88	22.55	18.71	ENCSR985KAT
K562	ASB3	ENSG00000115239.21	10.50	12.61	11.55	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ASB3 is not avaliable on ENCORE database.

Proteins bound to RNA

ASB3 RNA is bound by 27 proteins.

CanvasJS.com

eCLIP assay for ASB3 is not avaliable on ENCORE database.

27 proteins are bound to ASB3 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	53985100	53985195	-	intron-Distal	5.90907	36.93444	HepG2	PTBP1
chr2	53985108	53985185	-	intron-Distal	5.47201	15.55512	K562	PTBP1
chr2	53977311	53977393	-	intron-Distal	5.30070	14.71518	HepG2	U2AF2
chr2	54082079	54082125	-	intron-Distal	6.10216	13.99567	HepG2	QKI
chr2	53976875	53976924	-	intron-Distal	4.33975	11.61338	HepG2	U2AF2
chr2	54086511	54086596	-	intron-Distal	3.96390	11.33406	HepG2	HNRNPK
chr2	53955576	53955672	-	intron-Distal	5.53393	11.15144	HepG2	QKI
chr2	53941401	53941484	-	intron-Distal,intron-Proximal	4.66631	10.76443	K562	PRPF8
chr2	54085643	54085729	-	intron-Distal	4.28953	10.66089	HepG2	PTBP1
chr2	54081453	54081561	-	CDS,intron-Distal	5.32460	10.48467	K562	RBM15
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 63 entries

eCLIP assay for ASB3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ASB3 is not available on ENCORE database.
1 RBPs can affect the levels of ASB3.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ASB3 is not available on ENCORE database.

1 RBPs can affect the gene expression of ASB3 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ASB3	ENSG00000270898.1	16.95450	0.00000	99999.99990	4.31530	3.67210	HepG2	ZNF622
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 1 of 1 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ASB3 is not available on ENCORE database.

7 RBPs can affect the splicing of ASB3 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ASB3	ENSG00000270898.1	chr2	-	53975417	53975504	53956594	53956707	53977919	53978078	0.50600	0.00000	0.00000	included	HepG2	U2AF1
SE	ASB3	ENSG00000270898.1	chr2	-	53975417	53975504	53956594	53956707	53977919	53978078	0.49100	0.00000	0.00000	included	HepG2	U2AF2
SE	ASB3	ENSG00000270898.1	chr2	-	53975417	53975504	53956594	53956707	53977919	53978078	0.20000	0.00000	0.00006	included	K562	U2AF1
SE	ASB3	ENSG00000270898.1	chr2	-	53990618	53990743	53978051	53978078	53992513	53992722	0.24400	0.00039	0.03194	included	K562	HNRNPL
SE	ASB3	ENSG00000270898.1	chr2	-	53955848	53955984	53943702	53943880	53956594	53956707	-0.10500	0.00051	0.00690	excluded	K562	AQR
SE	ASB3	ENSG00000270898.1	chr2	-	53975417	53975504	53956594	53956707	53977919	53978078	0.12600	0.00052	0.08893	included	K562	SBDS
SE	ASB3	ENSG00000270898.1	chr2	-	53990618	53990743	53978051	53978078	53992513	53992722	-0.11600	0.00107	0.02939	excluded	K562	AGGF1
A3SS	ASB3	ENSG00000270898.1	chr2	-	53977919	53978126	53977919	53978078	53992513	53992722	0.09900	0.00134	0.00904	longer	K562	AQR
SE	ASB3	ENSG00000270898.1	chr2	-	53990618	53990743	53978051	53978078	53992513	53992722	-0.10700	0.00354	0.07042	excluded	K562	RBM15

Showing 1 to 9 of 9 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ASB3

General Information

Functions

Localization

Domains (AlphaFold: ASB3)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ASB3 is not avaliable on ENCORE database.

27 proteins are bound to ASB3 RNA:

eCLIP assay for ASB3 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ASB3 is not available on ENCORE database.

1 RBPs can affect the gene expression of ASB3 :

The Knockdown/knockout RNA-Seq assay for ASB3 is not available on ENCORE database.

7 RBPs can affect the splicing of ASB3 :

The Knockdown/knockout RNA-Seq assay for ASB3 is not avaliable on ENCORE database.