ABCG5

General Information

Gene Name : ABCG5
Gene ID : ENSG00000138075.12
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: ABCG5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	ABCG5	ENSG00000138075.12	0.00	0.00	0.00	ENCSR000AEF
HepG2	ABCG5	ENSG00000138075.12	10.82	11.33	11.07	ENCSR985KAT
K562	ABCG5	ENSG00000138075.12	0.00	0.01	0.01	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Proteins bound to RNA

ABCG5 RNA is bound by 21 proteins.

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eCLIP assay for ABCG5 is not avaliable on ENCORE database.

21 proteins are bound to ABCG5 RNA:

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Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr2	44064969	44065043	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.79166	22.80908	HepG2	PPIG
chr2	44065060	44065179	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.97975	15.04211	HepG2	AQR
chr2	44051357	44051382	-	CDS,intron-Distal,intron-Proximal	3.70495	10.68403	HepG2	BCLAF1
chr2	44063683	44063732	-	intron-Distal	4.13330	10.23600	HepG2	XPO5
chr2	44058871	44058909	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.53393	10.09745	HepG2	PRPF8
chr2	44058906	44058947	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.56007	9.99012	HepG2	PPIG
chr2	44065096	44065166	-	5'-UTR,intron-Distal,intron-Proximal	4.28953	9.75000	HepG2	SF3B4
chr2	44065450	44065553	-	5'-UTR,intron-Distal	3.82148	9.60640	HepG2	PRPF4
chr2	44065276	44065399	-	5'-UTR,intron-Distal	3.99548	9.16368	HepG2	UCHL5
chr2	44059089	44059155	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.11281	8.97671	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 43 entries

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for ABCG5 is not available on ENCORE database.
60 RBPs can affect the levels of ABCG5.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

60 RBPs can affect the gene expression of ABCG5 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
ABCG5	ENSG00000138075.7	732.38630	1206.29720	-0.71990	12.67490	11.72820	HepG2	RBM22
ABCG5	ENSG00000138075.7	533.01150	1111.09340	-1.05970	12.26230	11.22180	HepG2	AKAP1
ABCG5	ENSG00000138075.7	672.93050	1045.59410	-0.63580	9.94550	9.17310	HepG2	SRSF1
ABCG5	ENSG00000138075.7	455.35040	752.20530	-0.72410	10.02390	8.99740	HepG2	UTP3
ABCG5	ENSG00000138075.7	1580.80320	1042.00720	0.60120	9.66710	8.59920	HepG2	QKI
ABCG5	ENSG00000138075.7	524.05070	985.87310	-0.91170	9.42060	8.31410	HepG2	MATR3
ABCG5	ENSG00000138075.7	1556.57430	1082.92280	0.52330	8.80590	7.47140	HepG2	EIF4G1
ABCG5	ENSG00000138075.7	460.46860	768.64530	-0.73920	8.72250	7.25400	HepG2	EWSR1
ABCG5	ENSG00000138075.7	1429.79770	752.63240	0.92570	8.05370	7.01350	HepG2	DKC1
ABCG5	ENSG00000138075.7	539.53480	786.70470	-0.54410	7.26730	6.37830	HepG2	ACO1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 60 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

8 RBPs can affect the splicing of ABCG5 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.35300	0.00000	0.00050	excluded	HepG2	NCBP2
SE	ABCG5	ENSG00000138075.7	chr2	-	44041408	44041484			44039698	44040448	44041615	44041728	0.12000	0.00001	0.00460	included	HepG2	EIF3D
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.26400	0.00007	0.01013	excluded	HepG2	DDX3X
MXE	ABCG5	ENSG00000138075.7	chr2	-	44065175	44065352	44065675	44065787	44064972	44065094	44065985	44066004	-0.55000	0.00007	0.01014	2included	HepG2	RBM22
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	0.15500	0.00010	0.01066	included	HepG2	NCBP2
A3SS	ABCG5	ENSG00000138075.7	chr2	-	44051051	44051285			44051051	44051257	44051357	44051571	0.07700	0.00015	0.01652	longer	HepG2	SF3A3
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	0.13100	0.00020	0.02384	included	HepG2	G3BP1
SE	ABCG5	ENSG00000138075.7	chr2	-	44052027	44052157			44051357	44051571	44055121	44055254	-0.29800	0.00120	0.03532	excluded	HepG2	SF3A3
SE	ABCG5	ENSG00000138075.7	chr2	-	44049935	44050074			44047053	44047239	44051051	44051257	-0.06000	0.00476	0.08533	excluded	HepG2	SRSF1
SE	ABCG5	ENSG00000138075.7	chr2	-	44051703	44051898			44051357	44051571	44052027	44052157	-0.24600	0.00842	0.07958	excluded	HepG2	U2AF2

Showing 1 to 10 of 10 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

ABCG5

General Information

Functions

Localization

Domains (AlphaFold: ABCG5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

21 proteins are bound to ABCG5 RNA:

eCLIP assay for ABCG5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

60 RBPs can affect the gene expression of ABCG5 :

The Knockdown/knockout RNA-Seq assay for ABCG5 is not available on ENCORE database.

8 RBPs can affect the splicing of ABCG5 :

The Knockdown/knockout RNA-Seq assay for ABCG5 is not avaliable on ENCORE database.