TFP1

General Information

Gene Name : TFP1
Gene ID : ENSG00000242337.5
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: TFP1)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	TFP1	ENSG00000242337.5	0.00	0.04	0.02	ENCSR000AEF
HepG2	TFP1	ENSG00000242337.5	0.04	0.00	0.02	ENCSR985KAT
K562	TFP1	ENSG00000242337.5	0.00	0.00	0.00	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for TFP1 is not avaliable on ENCORE database.

Proteins bound to RNA

TFP1 RNA is bound by 25 proteins.

eCLIP assay for TFP1 is not avaliable on ENCORE database.

25 proteins are bound to TFP1 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr3	133472646	133472749	+	intron-Distal,intron-Proximal	3.03207	8.64163	HepG2	FUS
chr3	133471978	133472026	+	intron-Distal	3.35023	5.92572	HepG2	TAF15
chr3	133468776	133468816	+	intron-Distal	4.16070	4.81029	HepG2	TAF15
chr3	133467285	133467344	+	5'-UTR,CDS,intron-Distal	3.97576	400.00000	HepG2	DDX3X
chr3	133467337	133467399	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.11586	400.00000	HepG2	NOLC1
chr3	133470444	133470516	+	intron-Distal	3.27544	3.69754	HepG2	TAF15
chr3	133467430	133467463	+	CDS,intron-Distal,intron-Proximal	6.94384	26.41158	HepG2	PRPF8
chr3	133470736	133470828	+	intron-Distal	3.32409	3.39806	HepG2	ILF3
chr3	133467249	133467264	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.96348	48.08838	HepG2	AQR
chr3	133467241	133467251	+	intron-Distal,intron-Proximal	3.69840	15.20972	HepG2	EFTUD2
chr3	133465398	133465433	+	intron-Distal,intron-Proximal	3.65193	14.55306	HepG2	RBM22
chr3	133467374	133467397	+	CDS,intron-Distal,intron-Proximal	3.13429	74.68460	HepG2	ZNF800
chr3	133465338	133465353	+	intron-Distal,intron-Proximal	3.02281	5.50350	HepG2	SUPV3L1
chr3	133465283	133465296	+	5'-UTR,CDS,intron-Distal	4.60735	400.00000	HepG2	DDX3X
chr3	133467291	133467352	+	5'-UTR,CDS,intron-Distal	3.20024	5.50234	K562	DHX30
chr3	133465330	133465373	+	intron-Distal,intron-Proximal	4.08170	70.02304	HepG2	PRPF8
chr3	133467181	133467229	+	intron-Distal,intron-Proximal	5.75103	48.28795	HepG2	AQR
chr3	133467229	133467249	+	intron-Distal,intron-Proximal	5.61291	58.65228	HepG2	AQR
chr3	133467352	133467402	+	CDS,intron-Distal,intron-Proximal	3.31114	76.93442	HepG2	SND1
chr3	133471597	133471637	+	intron-Distal	3.83805	3.69388	HepG2	XPO5
chr3	133472338	133472372	+	intron-Distal,intron-Proximal	4.14784	5.49140	HepG2	RBM5
chr3	133465349	133465370	+	intron-Distal,intron-Proximal	3.52919	21.31565	HepG2	EFTUD2
chr3	133472718	133472750	+	intron-Distal	3.51251	15.03564	HepG2	EFTUD2
chr3	133467403	133467422	+	CDS,intron-Distal,intron-Proximal	3.03177	37.94604	HepG2	SDAD1
chr3	133467400	133467420	+	CDS,intron-Distal,intron-Proximal	3.75479	400.00000	HepG2	RPS3
chr3	133467186	133467250	+	intron-Distal,intron-Proximal	3.55854	6.24865	HepG2	SF3B4
chr3	133465330	133465341	+	intron-Distal,intron-Proximal	3.15085	11.42764	HepG2	GRWD1
chr3	133467404	133467429	+	CDS,intron-Distal,intron-Proximal	3.31252	72.61815	HepG2	SND1
chr3	133467335	133467403	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.38480	400.00000	HepG2	SDAD1
chr3	133467255	133467280	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.64722	400.00000	HepG2	RPS3
chr3	133465324	133465328	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.53117	400.00000	HepG2	RPS3
chr3	133472888	133472929	+	intron-Distal	3.91534	4.67847	HepG2	FUS
chr3	133465243	133465283	+	5'-UTR,intron-Distal	3.72469	400.00000	HepG2	RPS3
chr3	133465353	133465371	+	intron-Distal,intron-Proximal	3.02926	9.66336	HepG2	SUPV3L1
chr3	133467299	133467321	+	5'-UTR,CDS,intron-Distal	4.76618	400.00000	HepG2	RPS3
chr3	133465305	133465321	+	5'-UTR,CDS,intron-Distal	4.12443	25.04231	HepG2	AQR
chr3	133465328	133465370	+	intron-Distal,intron-Proximal	3.32185	28.03274	HepG2	BUD13
chr3	133465373	133465427	+	intron-Distal,intron-Proximal	3.09184	13.74355	HepG2	PRPF8
chr3	133465305	133465329	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.81355	400.00000	HepG2	DDX3X
chr3	133465321	133465334	+	5'-UTR,CDS,intron-Distal,intron-Proximal	5.59506	80.18229	HepG2	AQR
chr3	133467352	133467433	+	CDS,intron-Distal,intron-Proximal	4.20024	11.14119	K562	DHX30
chr3	133467253	133467286	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.60983	5.19256	K562	DHX30
chr3	133467331	133467345	+	5'-UTR,CDS,intron-Distal	3.93843	400.00000	HepG2	RPS3
chr3	133473162	133473201	+	intron-Distal	3.56173	3.40030	HepG2	FUS
chr3	133467424	133467428	+	CDS,intron-Distal,intron-Proximal	3.79886	400.00000	HepG2	RPS3
chr3	133467322	133467331	+	5'-UTR,CDS,intron-Distal	4.58118	400.00000	HepG2	RPS3
chr3	133467212	133467250	+	intron-Distal,intron-Proximal	3.87356	23.52460	HepG2	SF3A3
chr3	133473175	133473261	+	intron-Distal,intron-Proximal	4.82880	7.11359	HepG2	HNRNPK
chr3	133467347	133467400	+	CDS,intron-Distal,intron-Proximal	3.89104	400.00000	HepG2	RPS3
chr3	133465371	133465420	+	intron-Distal,intron-Proximal	6.08849	49.81568	HepG2	AQR
chr3	133465371	133465415	+	intron-Distal,intron-Proximal	3.17708	19.42783	HepG2	EFTUD2
chr3	133466210	133466249	+	intron-Distal,intron-Proximal	3.15873	8.44190	HepG2	XPO5
chr3	133467344	133467405	+	CDS,intron-Distal,intron-Proximal	3.31007	400.00000	HepG2	DDX3X
chr3	133465251	133465328	+	5'-UTR,CDS,intron-Distal,intron-Proximal	7.00352	11.17074	K562	AATF
chr3	133467280	133467299	+	5'-UTR,CDS,intron-Distal	4.77732	400.00000	HepG2	RPS3
chr3	133465296	133465305	+	5'-UTR,CDS,intron-Distal	4.55823	400.00000	HepG2	DDX3X
chr3	133465242	133465281	+	5'-UTR,intron-Distal	4.79229	400.00000	HepG2	DDX3X
chr3	133472176	133472212	+	intron-Distal	3.53167	3.40030	HepG2	FUS
chr3	133465334	133465366	+	intron-Distal,intron-Proximal	6.35126	72.62055	HepG2	AQR
chr3	133465329	133465341	+	intron-Distal,intron-Proximal	3.17092	5.74938	HepG2	NCBP2
chr3	133467264	133467316	+	5'-UTR,CDS,intron-Distal	4.64351	41.56946	HepG2	AQR
chr3	133467255	133467287	+	5'-UTR,CDS,intron-Distal,intron-Proximal	6.22532	5.27957	K562	AATF
chr3	133467253	133467285	+	5'-UTR,CDS,intron-Distal,intron-Proximal	4.71449	400.00000	HepG2	DDX3X
chr3	133467212	133467253	+	intron-Distal,intron-Proximal	4.52473	48.52455	HepG2	BUD13
chr3	133465249	133465328	+	5'-UTR,CDS,intron-Distal,intron-Proximal	3.45050	6.12563	K562	DHX30
chr3	133467284	133467337	+	5'-UTR,CDS,intron-Distal	3.50060	400.00000	HepG2	NOLC1
chr3	133465283	133465316	+	5'-UTR,CDS,intron-Distal	4.26537	400.00000	HepG2	RPS3
chr3	133472552	133472588	+	intron-Distal,intron-Proximal	3.71331	7.45106	HepG2	RBM5
chr3	133472379	133472433	+	intron-Distal,intron-Proximal	4.76751	42.42569	HepG2	SF3A3
chr3	133472599	133472624	+	intron-Distal,intron-Proximal	3.28788	11.23091	HepG2	EFTUD2
chr3	133473337	133473352	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.63853	18.91154	HepG2	SND1
chr3	133473338	133473348	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.64765	12.14632	HepG2	ZNF800
chr3	133473286	133473355	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.05949	39.49716	HepG2	SF3A3
chr3	133472437	133472469	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.12254	400.00000	HepG2	RPS3
chr3	133472499	133472548	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.40129	70.86163	HepG2	ZNF800
chr3	133473337	133473340	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	5.28704	76.53669	HepG2	LIN28B
chr3	133473273	133473345	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.71031	13.61011	HepG2	AQR
chr3	133473266	133473349	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	4.57870	10.99561	HepG2	SF3B4
chr3	133473334	133473415	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.28167	400.00000	HepG2	SDAD1
chr3	133472377	133472427	+	intron-Distal,intron-Proximal	5.73595	10.92488	HepG2	AQR
chr3	133472390	133472403	+	intron-Distal,intron-Proximal	3.51572	8.63702	HepG2	EFTUD2
chr3	133473261	133473330	+	intron-Distal,intron-Proximal	3.39332	8.46488	HepG2	RBM5
chr3	133472438	133472440	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.28857	59.15718	HepG2	SND1
chr3	133473338	133473348	+	3'-UTR,5'-UTR,CDS,intron-Distal,intron-Proximal	3.55783	15.27040	HepG2	NOLC1
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for TFP1 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for TFP1 is not available on ENCORE database.
No RBPs affect the gene expression of TFP1 on ENCORE database.

TFP1

General Information

Functions

Localization

Domains (AlphaFold: TFP1)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for TFP1 is not avaliable on ENCORE database.

25 proteins are bound to TFP1 RNA:

eCLIP assay for TFP1 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for TFP1 is not available on ENCORE database.

No RBPs affect the gene expression of TFP1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for TFP1 is not available on ENCORE database.

No RBPs affect the alternative splcing events of TFP1 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for TFP1 is not avaliable on ENCORE database.