RP11-75C10.7

General Information

Gene Name       : RP11-75C10.7
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-75C10.7)


Antibody Validation


Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-75C10.7 is not avaliable on ENCORE database.



Proteins bound to RNA

  • RP11-75C10.7 RNA is bound by 8 proteins.  







eCLIP assay for RP11-75C10.7 is not avaliable on ENCORE database.





8 proteins are bound to RP11-75C10.7 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr177546616075466238+intron-Distal6.46877400.00000HepG2AGGF1
chr177546667575466728+intron-Distal5.8065460.19305HepG2XPO5
chr177546590475466058+intron-Distal5.7330874.11365HepG2XPO5
chr177546611775466178+intron-Distal4.4441411.92324HepG2CDC40
chr177546638575466415+intron-Distal4.610549.13550HepG2GTF2F1
chr177546644475466529+intron-Distal3.2921819.96545HepG2HNRNPL
chr177546656175466622+intron-Distal6.18496400.00000HepG2AGGF1
chr177546658875466709+intron-Distal7.2848534.44241HepG2GTF2F1
chr177546656875466764+intron-Distal9.41613167.12001K562AGGF1
chr177546670775466847+intron-Distal4.5331766.28280HepG2HNRNPL
chr177546623875466323+intron-Distal6.5281947.97246HepG2XPO5
chr177546617275466238+intron-Distal4.3223628.86366HepG2HNRNPL
chr177546671075466809+intron-Distal3.775064.70733K562HNRNPL
chr177546606075466087+intron-Distal6.1362957.47292HepG2AGGF1
chr177546617775466405+intron-Distal6.3124526.78264HepG2YBX3
chr177546670975466834+intron-Distal7.4341847.59549HepG2GTF2F1
chr177546669875466818+intron-Distal4.620627.18289K562YBX3
chr177546632075466399+intron-Distal4.6250725.97392HepG2HNRNPL
chr177546591475465999+intron-Distal4.812928.45437HepG2YBX3
chr177546588675465984+intron-Distal6.24542400.00000HepG2AGGF1
chr177546615275466230+intron-Distal6.9257387.94112K562AGGF1
chr177546625675466328+intron-Distal6.6490019.57148HepG2GTF2F1
chr177546640775466506+intron-Distal6.8422480.45351K562AGGF1
chr177546639975466444+intron-Distal3.2994714.39418HepG2HNRNPL
chr177546587875465999+intron-Distal8.3923881.48867K562AGGF1
chr177546607675466177+intron-Distal3.8687712.39997HepG2YBX3
chr177546610975466214+intron-Distal6.6599424.61370HepG2GTF2F1
chr177546673675466798+intron-Distal4.328509.18070HepG2LARP4
chr177546623875466314+intron-Distal6.12505400.00000HepG2AGGF1
chr177546672875466848+intron-Distal,intron-Proximal6.45799400.00000HepG2XPO5
chr177546658975466679+intron-Distal5.1952823.64925HepG2CDC40
chr177546661575466674+intron-Distal3.903143.14791K562HNRNPL
chr177546642175466548+intron-Distal5.5977716.26934HepG2YBX3
chr177546652975466680+intron-Distal4.4908953.94947HepG2HNRNPL
chr177546598475466037+intron-Distal5.2244761.02219HepG2AGGF1
chr177546667675466727+intron-Distal5.4265261.75614HepG2AGGF1
chr177546659075466792+intron-Distal4.6586328.62159HepG2YBX3
chr177546683475466883+intron-Distal,intron-Proximal4.086059.39936HepG2GTF2F1
chr177546606575466172+intron-Distal4.0602233.63795HepG2HNRNPL
chr177546633775466395+intron-Distal6.80073124.82752HepG2AGGF1
chr177546576175465871+intron-Distal,intron-Proximal4.182154.32914K562YBX3
chr177546608875466156+intron-Distal5.59343400.00000HepG2AGGF1
chr177546587475466035+intron-Distal4.4154238.77516HepG2HNRNPL
chr177546581475465860+intron-Distal,intron-Proximal5.4214022.39653HepG2AGGF1
chr177546673175466788+intron-Distal3.065343.10435K562AKAP8L
chr177546644675466519+intron-Distal4.98646400.00000HepG2AGGF1
chr177546631475466337+intron-Distal8.2028376.63434HepG2AGGF1
chr177546632375466390+intron-Distal7.8576345.26283HepG2XPO5
chr177546639075466529+intron-Distal5.9279361.35846HepG2XPO5
chr177546672775466836+intron-Distal5.84678400.00000HepG2AGGF1
chr177546662275466676+intron-Distal5.95302400.00000HepG2AGGF1
chr177546614175466238+intron-Distal6.1958050.01925HepG2XPO5
chr177546667975466789+intron-Distal4.3247825.50137HepG2CDC40
chr177546606975466152+intron-Distal8.2991780.54402K562AGGF1
chr177546586375466014+intron-Distal5.4513124.83391HepG2CDC40
chr177546639575466442+intron-Distal5.5827665.64708HepG2AGGF1
chr177546652975466671+intron-Distal6.72857400.00000HepG2XPO5
chr177546623975466309+intron-Distal7.2593973.13951K562AGGF1
chr177546630975466406+intron-Distal8.3966681.01634K562AGGF1
chr177546605875466141+intron-Distal5.8224533.61845HepG2XPO5
chr177546623875466320+intron-Distal4.3330126.69176HepG2HNRNPL
chr177546647475466516+intron-Distal5.8745011.61947HepG2GTF2F1
chr177546577475465833+intron-Distal,intron-Proximal6.1442727.14193HepG2XPO5
chr177546574675465811+intron-Distal,intron-Proximal4.095065.98771K562GTF2F1
chr177546578075465818+intron-Distal,intron-Proximal3.165024.52445HepG2YBX3
chr177546693675467021+intron-Distal,intron-Proximal3.0617611.76761HepG2CDC40
chr177546691975467025+intron-Distal,intron-Proximal4.9371117.70556HepG2YBX3
chr177546573275465821+intron-Distal,intron-Proximal4.9311812.45198HepG2GTF2F1
chr177546575275465814+intron-Distal,intron-Proximal5.7774234.79369HepG2AGGF1
chr177546692375467019+intron-Distal,intron-Proximal4.480059.04269K562GTF2F1
chr177546693575467008+intron-Distal,intron-Proximal5.0030326.20140HepG2AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-75C10.7 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-75C10.7 is not available on ENCORE database.

  • 2 RBPs can affect the levels of RP11-75C10.7.  








The Knockdown/knockout RNA-Seq assay for RP11-75C10.7 is not available on ENCORE database.





2 RBPs can affect the gene expression of RP11-75C10.7 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-75C10.7ENSG00000267263.114.771502.181702.759202.019101.47520HepG2MATR3
RP11-75C10.7ENSG00000267263.114.287102.233802.677102.004901.46130HepG2NCBP2
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-75C10.7 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-75C10.7 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-75C10.7 is not avaliable on ENCORE database.