RP11-599B13.6

General Information

Gene Name       : RP11-599B13.6
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-599B13.6)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-599B13.6 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-599B13.6 RNA is bound by 24 proteins.  







eCLIP assay for RP11-599B13.6 is not avaliable on ENCORE database.





24 proteins are bound to RP11-599B13.6 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr1780649858065084-3'-UTR,CDS,intron-Distal3.116747.16368HepG2PPIG
chr1780648328064881-CDS,intron-Distal,intron-Proximal3.532206.71722K562SF3B4
chr1780649488065062-CDS,intron-Distal3.2451814.57201K562ZNF622
chr1780647448064800-3'-UTR,CDS,intron-Distal,intron-Proximal3.568045.43815HepG2PRPF8
chr1780647418064843-3'-UTR,CDS,intron-Distal,intron-Proximal3.368078.56673HepG2PPIG
chr1780649278064985-CDS,intron-Distal,intron-Proximal3.833359.58474HepG2PPIG
chr1780649648065081-3'-UTR,CDS,intron-Distal4.641404.35343K562SRSF1
chr1780650678065134-3'-UTR,CDS,intron-Distal,intron-Proximal3.193595.61685K562AQR
chr1780630368063112-3'-UTR,intron-Distal3.386213.34554K562NOLC1
chr1780630168063087-3'-UTR,intron-Distal4.799745.56405HepG2LSM11
chr1780637128063804-3'-UTR,intron-Distal,intron-Proximal3.864467.58507HepG2HNRNPK
chr1780550338055106-intron-Distal3.130054.62806K562CSTF2T
chr1780625968062629-3'-UTR,intron-Distal3.772515.99425K562CSTF2T
chr1780574618057512-intron-Distal3.808133.43867K562CSTF2T
chr1780656918065761-intron-Distal,intron-Proximal4.137223.56713HepG2SF3B4
chr1780632628063334-3'-UTR,intron-Distal3.7102610.59618K562CSTF2T
chr1780626748062737-3'-UTR,intron-Distal3.013796.36898K562LSM11
chr1780638038063839-3'-UTR,intron-Distal5.3507911.26688HepG2PCBP2
chr1780638518063933-3'-UTR,intron-Distal5.0338942.57787HepG2PCBP2
chr1780638428063911-3'-UTR,intron-Distal4.070799.19663HepG2PTBP1
chr1780641408064228-3'-UTR,CDS,intron-Distal3.175708.26020HepG2U2AF2
chr1780631328063183-3'-UTR,intron-Distal3.847894.57253K562HNRNPK
chr1780587068058789-intron-Distal3.549365.12237K562CSTF2T
chr1780654548065516-intron-Distal,intron-Proximal4.422715.36494K562DROSHA
chr1780638398063928-3'-UTR,intron-Distal3.8855612.66324HepG2HNRNPK
chr1780626268062674-3'-UTR,intron-Distal3.372916.48120K562LSM11
chr1780638308063902-3'-UTR,intron-Distal3.9741016.06320K562ILF3
chr1780640118064073-3'-UTR,intron-Distal,intron-Proximal5.289848.61835K562TARDBP
chr1780632908063335-3'-UTR,intron-Distal4.6454214.32541HepG2PCBP2
chr1780654358065494-intron-Distal,intron-Proximal3.518454.06013K562PRPF8
chr1780632818063326-3'-UTR,intron-Distal3.166083.72734HepG2CSTF2T
chr1780654498065517-intron-Distal,intron-Proximal4.024573.69252K562EFTUD2
chr1780637298063803-3'-UTR,intron-Distal6.4720534.67995HepG2PCBP2
chr1780626298062663-3'-UTR,intron-Distal3.850096.22996K562CSTF2T
chr1780654668065536-intron-Distal,intron-Proximal4.939587.20266K562BUD13
chr1780640108064075-3'-UTR,intron-Distal,intron-Proximal4.3415723.89204K562PUM2
chr1780628088062875-3'-UTR,intron-Distal3.709395.81997HepG2LSM11
chr1780636088063691-3'-UTR,intron-Distal,intron-Proximal5.9328321.87517K562PABPC4
chr1780626278062671-3'-UTR,intron-Distal4.605464.76744HepG2LSM11
chr1780637208063830-3'-UTR,intron-Distal,intron-Proximal4.2717013.09338K562ILF3
chr1780625898062654-3'-UTR,intron-Distal3.229453.64832HepG2ZC3H11A
chr1780548338054949-intron-Distal3.869326.22996K562CSTF2T
chr1780634098063529-3'-UTR,intron-Distal3.228239.16858K562MATR3
chr1780626848062741-3'-UTR,intron-Distal3.917666.86123K562DDX6
chr1780632808063361-3'-UTR,intron-Distal3.248376.72401K562HNRNPK
chr1780638288063948-3'-UTR,intron-Distal4.3527836.89201K562PCBP1
chr1780591788059241-intron-Distal3.998543.80512K562CSTF2T
chr1780626838062767-3'-UTR,intron-Distal3.282916.12973K562NOLC1
chr1780628108062868-3'-UTR,intron-Distal4.140293.51768K562NOLC1
chr1780626238062683-3'-UTR,intron-Distal4.680474.88343K562NOLC1
chr1780646788064757-3'-UTR,intron-Distal,intron-Proximal3.070214.63797K562PRPF8
chr1780637308063827-3'-UTR,intron-Distal3.347105.70259K562HNRNPK
chr1780625878062626-3'-UTR,intron-Distal5.200877.82098K562LSM11
chr1780654758065532-intron-Distal,intron-Proximal4.538676.99120K562AQR
chr1780644208064547-3'-UTR,intron-Distal,intron-Proximal3.526334.25147HepG2LSM11
chr1780626688062746-3'-UTR,intron-Distal3.016414.06631HepG2ZC3H11A
chr1780632888063332-3'-UTR,intron-Distal5.169357.41017K562PTBP1
chr1780638458063896-3'-UTR,intron-Distal3.0388910.97629K562PTBP1
chr1780637378063785-3'-UTR,intron-Distal4.315003.72005K562MATR3
chr1780626608062753-3'-UTR,intron-Distal4.814768.42748K562ZC3H11A
chr1780638418063940-3'-UTR,intron-Distal6.247097.30415HepG2PCBP1
chr1780647438064780-3'-UTR,intron-Distal,intron-Proximal3.4444411.02376K562AQR
chr1780647808064790-3'-UTR,CDS,intron-Distal,intron-Proximal3.207606.52662K562AQR
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-599B13.6 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-599B13.6 is not available on ENCORE database.

  • No RBPs affect the gene expression of RP11-599B13.6 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for RP11-599B13.6 is not available on ENCORE database.






No RBPs affect the gene expression of RP11-599B13.6 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for RP11-599B13.6 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-599B13.6 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-599B13.6 is not avaliable on ENCORE database.