RP11-465B22.5

General Information

Gene Name       : RP11-465B22.5
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-465B22.5)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-465B22.5 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-465B22.5 RNA is bound by 6 proteins.  







eCLIP assay for RP11-465B22.5 is not avaliable on ENCORE database.





6 proteins are bound to RP11-465B22.5 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr110769231077036+intron-Distal6.1422012.54389HepG2DDX59
chr110726401072703+intron-Distal3.733199.99034HepG2FAM120A
chr110742131074274+intron-Distal4.4321710.21237HepG2CSTF2T
chr110769031076999+intron-Distal3.057103.52395HepG2HNRNPK
chr110732601073336+intron-Distal3.678007.34596HepG2CSTF2T
chr110741471074213+intron-Distal3.790027.80319HepG2CSTF2T
chr110743631074402+intron-Distal3.229225.14779HepG2FAM120A
chr110732691073337+intron-Distal3.430276.05701HepG2FAM120A
chr110772511077308+intron-Distal3.844867.81475HepG2CSTF2T
chr110726481072709+intron-Distal4.8752015.86857HepG2CSTF2T
chr110771131077237+intron-Distal5.7249319.36127HepG2CSTF2T
chr110743031074359+intron-Distal4.4309913.77966HepG2CSTF2T
chr110745091074555+intron-Distal3.434964.33898HepG2FAM120A
chr110773461077392+intron-Distal4.544597.10319HepG2CSTF2T
chr110728081072841+intron-Distal5.569768.72481HepG2CSTF2T
chr110745191074542+intron-Distal4.729904.43799HepG2CSTF2T
chr110741671074370+intron-Distal3.951663.48722HepG2PRPF4
chr110772171077288+intron-Distal3.059714.49349HepG2DDX59
chr110770141077076+intron-Distal4.218257.56410HepG2CSTF2T
chr110743591074410+intron-Distal4.0283611.03055HepG2CSTF2T
chr110741601074264+intron-Distal3.133047.17321HepG2FAM120A
chr110739831074087+intron-Distal6.3779217.45635HepG2CSTF2T
chr110727201072790+intron-Distal3.047443.62838HepG2FAM120A
chr110769091077001+intron-Distal6.3670920.19514HepG2PCBP2
chr110725121072570+intron-Proximal5.5431719.08996HepG2CSTF2T
chr110761251076163+intron-Proximal3.241366.23903HepG2CSTF2T
chr110724251072492+intron-Proximal5.620749.90837HepG2FAM120A
chr110725111072579+intron-Proximal3.547446.41767HepG2FAM120A
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-465B22.5 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-465B22.5 is not available on ENCORE database.

  • 1 RBPs can affect the levels of RP11-465B22.5.  








The Knockdown/knockout RNA-Seq assay for RP11-465B22.5 is not available on ENCORE database.





1 RBPs can affect the gene expression of RP11-465B22.5 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-465B22.5ENSG00000223823.19.460700.499804.242302.258601.79740HepG2TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-465B22.5 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-465B22.5 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-465B22.5 is not avaliable on ENCORE database.