RP11-391L3.1

General Information

Gene Name       : RP11-391L3.1
Gene ID             :
Essential Gene : No

Functions

Localization

Domains (AlphaFold: RP11-391L3.1)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for RP11-391L3.1 is not avaliable on ENCORE database.



Proteins bound to RNA
  • RP11-391L3.1 RNA is bound by 1 proteins.  







eCLIP assay for RP11-391L3.1 is not avaliable on ENCORE database.





1 proteins are bound to RP11-391L3.1 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr168142001681420085+3'-UTR,intron-Distal4.6133712.68141K562TARDBP
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for RP11-391L3.1 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for RP11-391L3.1 is not available on ENCORE database.

  • 15 RBPs can affect the levels of RP11-391L3.1.  








The Knockdown/knockout RNA-Seq assay for RP11-391L3.1 is not available on ENCORE database.





15 RBPs can affect the gene expression of RP11-391L3.1 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
RP11-391L3.1ENSG00000272923.10.4855013.10040-4.753902.934302.22230HepG2HNRNPC
RP11-391L3.1ENSG00000272923.11.5648013.01390-3.056002.605002.01770HepG2HNRNPU
RP11-391L3.1ENSG00000272923.10.000007.72110-99999.999992.051001.42160HepG2IGF2BP1
RP11-391L3.1ENSG00000272923.10.5686013.29360-4.547203.829802.98070HepG2ILF2
RP11-391L3.1ENSG00000272923.127.108204.260802.669403.638903.01100HepG2TAF15
RP11-391L3.1ENSG00000272923.12.6665012.75810-2.258401.958401.46800HepG2TRIM56
RP11-391L3.1ENSG00000272923.10.4780011.22750-4.553702.448201.87730HepG2UTP3
RP11-391L3.1ENSG00000272923.10.0000011.18790-99999.999993.089301.83380K562AARS
RP11-391L3.1ENSG00000272923.14.6359020.62480-2.153502.462101.66350K562FIP1L1
RP11-391L3.1ENSG00000272923.10.0000016.96200-99999.999994.301703.12580K562HNRNPM
RP11-391L3.1ENSG00000272923.16.4366027.96600-2.119303.179302.33020K562HSPD1
RP11-391L3.1ENSG00000272923.12.2815023.41000-3.359104.394703.32840K562PPIG
RP11-391L3.1ENSG00000272923.13.2597025.31300-2.957103.582502.02570K562SFPQ
RP11-391L3.1ENSG00000272923.10.000009.49150-99999.999992.373101.44060K562SRFBP1
RP11-391L3.1ENSG00000272923.10.0000010.54880-99999.999992.842401.89340K562TIAL1
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for RP11-391L3.1 is not available on ENCORE database.






No RBPs affect the alternative splcing events of RP11-391L3.1 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for RP11-391L3.1 is not avaliable on ENCORE database.