RP1-4G17.5

General Information

Gene Name : RP1-4G17.5
Gene ID :
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: RP1-4G17.5)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for RP1-4G17.5 is not avaliable on ENCORE database.

Proteins bound to RNA

RP1-4G17.5 RNA is bound by 18 proteins.

eCLIP assay for RP1-4G17.5 is not avaliable on ENCORE database.

18 proteins are bound to RP1-4G17.5 RNA:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr17	7150107	7150153	-	3'-UTR,CDS,intron-Distal,intron-Proximal	5.23022	37.73205	K562	PUM2
chr17	7150153	7150168	-	3'-UTR,CDS,intron-Distal	5.01247	11.82794	K562	PUM2
chr17	7150108	7150152	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.03554	5.77687	HepG2	PPIG
chr17	7150594	7150629	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.27449	7.44928	HepG2	PPIG
chr17	7150166	7150180	-	3'-UTR,CDS,intron-Distal	3.23785	3.69775	K562	YBX3
chr17	7150155	7150166	-	3'-UTR,CDS,intron-Distal	3.09298	3.50044	K562	YBX3
chr17	7150307	7150401	-	3'-UTR,CDS,intron-Distal,intron-Proximal	4.73482	4.86944	K562	AQR
chr17	7150653	7150662	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.82295	4.80912	HepG2	PPIG
chr17	7150643	7150662	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.80390	3.02541	K562	IGF2BP2
chr17	7150639	7150663	-	3'-UTR,CDS,intron-Distal,intron-Proximal	3.73553	4.60014	HepG2	IGF2BP1
chr17	7155042	7155078	-	intron-Distal,intron-Proximal	3.48215	21.44079	HepG2	DDX3X
chr17	7154922	7154987	-	5'-UTR,intron-Distal,intron-Proximal	6.99523	400.00000	HepG2	DDX59
chr17	7154614	7154676	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.27243	4.97433	K562	DHX30
chr17	7154942	7154998	-	5'-UTR,intron-Distal,intron-Proximal	4.96315	49.81813	K562	PCBP1
chr17	7154680	7154744	-	5'-UTR,intron-Distal,intron-Proximal	4.47779	47.40175	HepG2	DDX3X
chr17	7154915	7154945	-	5'-UTR,intron-Distal,intron-Proximal	7.64583	400.00000	HepG2	PCBP2
chr17	7155041	7155067	-	intron-Distal,intron-Proximal	5.78129	31.41282	HepG2	DDX59
chr17	7154937	7154988	-	5'-UTR,intron-Distal,intron-Proximal	3.18301	5.42369	HepG2	CSTF2T
chr17	7155074	7155127	-	5'-UTR,intron-Distal,intron-Proximal	3.89775	8.12116	K562	DDX3X
chr17	7154915	7154981	-	5'-UTR,intron-Distal,intron-Proximal	4.02080	13.33584	HepG2	ILF3
chr17	7154912	7154915	-	5'-UTR,intron-Distal	7.18343	65.26064	HepG2	PCBP2
chr17	7155195	7155261	-	5'-UTR,intron-Distal	3.29102	7.16911	K562	CSTF2T
chr17	7154896	7154941	-	5'-UTR,intron-Distal,intron-Proximal	5.38675	14.13409	HepG2	PCBP1
chr17	7154794	7154877	-	5'-UTR,intron-Distal,intron-Proximal	4.37422	10.77571	HepG2	PCBP1
chr17	7154941	7155007	-	5'-UTR,intron-Distal,intron-Proximal	5.30111	37.34472	HepG2	PCBP1
chr17	7154740	7154782	-	5'-UTR,intron-Distal,intron-Proximal	5.26808	8.25079	K562	HNRNPK
chr17	7154513	7154519	-	CDS,intron-Distal,intron-Proximal	3.15056	3.99175	HepG2	IGF2BP1
chr17	7154944	7154964	-	5'-UTR,intron-Distal,intron-Proximal	4.36897	17.07460	K562	ILF3
chr17	7154918	7154937	-	5'-UTR,intron-Distal,intron-Proximal	3.04885	8.56422	HepG2	CSTF2T
chr17	7154744	7154812	-	5'-UTR,intron-Distal,intron-Proximal	3.54642	33.95849	HepG2	DDX3X
chr17	7154800	7154970	-	5'-UTR,intron-Distal,intron-Proximal	5.70707	75.89164	K562	HNRNPK
chr17	7154790	7154943	-	5'-UTR,intron-Distal,intron-Proximal	3.00237	17.52615	HepG2	LARP4
chr17	7154519	7154535	-	CDS,intron-Distal	3.21803	4.45816	HepG2	IGF2BP1
chr17	7154876	7154960	-	5'-UTR,intron-Distal,intron-Proximal	4.72101	41.63373	K562	DROSHA
chr17	7154890	7154909	-	5'-UTR,intron-Distal	4.71785	77.68689	K562	ILF3
chr17	7154745	7154790	-	5'-UTR,intron-Distal,intron-Proximal	5.20347	34.26712	HepG2	DDX59
chr17	7154812	7154898	-	5'-UTR,intron-Distal,intron-Proximal	3.41910	30.27375	HepG2	DDX3X
chr17	7154874	7154942	-	5'-UTR,intron-Distal,intron-Proximal	5.06088	62.66722	K562	PCBP1
chr17	7154909	7154944	-	5'-UTR,intron-Distal,intron-Proximal	5.45677	81.61921	K562	ILF3
chr17	7154886	7154912	-	5'-UTR,intron-Distal	7.03291	83.31276	HepG2	PCBP2
chr17	7154789	7154915	-	5'-UTR,intron-Distal,intron-Proximal	3.47783	9.31358	HepG2	ILF3
chr17	7154945	7154996	-	5'-UTR,intron-Distal,intron-Proximal	6.91028	400.00000	HepG2	PCBP2
chr17	7154809	7154922	-	5'-UTR,intron-Distal,intron-Proximal	6.43998	400.00000	HepG2	DDX59
chr17	7155078	7155127	-	5'-UTR,intron-Distal,intron-Proximal	4.07387	33.61531	HepG2	DDX3X
chr17	7154512	7154539	-	CDS,intron-Distal,intron-Proximal	3.45518	3.81856	K562	IGF2BP1
chr17	7154649	7154738	-	5'-UTR,intron-Distal,intron-Proximal	5.77285	15.77311	HepG2	PCBP1
chr17	7154935	7155007	-	5'-UTR,intron-Distal,intron-Proximal	6.35961	63.57340	HepG2	HNRNPK
chr17	7154604	7154680	-	5'-UTR,CDS,intron-Distal,intron-Proximal	4.85125	59.67526	HepG2	DDX3X
chr17	7154839	7154890	-	5'-UTR,intron-Distal	3.71967	51.77198	K562	ILF3
chr17	7155162	7155255	-	5'-UTR,intron-Distal	5.22288	54.82495	HepG2	DDX3X
chr17	7154733	7154780	-	5'-UTR,intron-Distal,intron-Proximal	3.27705	7.64587	K562	ILF3
chr17	7155067	7155126	-	5'-UTR,intron-Distal,intron-Proximal	5.49390	60.28760	HepG2	DDX59
chr17	7154683	7154728	-	5'-UTR,intron-Distal,intron-Proximal	4.20775	14.65557	K562	PCBP1
chr17	7154634	7154709	-	5'-UTR,intron-Distal,intron-Proximal	3.55603	8.97686	K562	HNRNPK
chr17	7155169	7155204	-	5'-UTR,intron-Distal	3.36635	3.72734	HepG2	CSTF2T
chr17	7154806	7154949	-	5'-UTR,intron-Distal,intron-Proximal	3.04252	5.36979	K562	PUM1
chr17	7154817	7154935	-	5'-UTR,intron-Distal,intron-Proximal	5.35741	82.78704	HepG2	HNRNPK
chr17	7155199	7155262	-	5'-UTR,intron-Distal	4.88417	9.67018	K562	DDX3X
chr17	7154508	7154565	-	CDS,intron-Distal,intron-Proximal	3.57789	5.11891	HepG2	GRWD1
chr17	7154557	7154651	-	5'-UTR,CDS,intron-Distal,intron-Proximal	3.21534	6.34300	HepG2	DROSHA
chr17	7154799	7154960	-	5'-UTR,intron-Distal,intron-Proximal	3.72360	58.12902	K562	CSTF2T
chr17	7154800	7154876	-	5'-UTR,intron-Distal,intron-Proximal	4.10598	23.17462	K562	DROSHA
chr17	7154793	7154874	-	5'-UTR,intron-Distal,intron-Proximal	4.51897	46.58095	K562	PCBP1
chr17	7154819	7154886	-	5'-UTR,intron-Distal,intron-Proximal	5.32311	45.49328	HepG2	PCBP2
chr17	7154511	7154542	-	CDS,intron-Distal,intron-Proximal	4.54345	8.68543	HepG2	PPIG
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

eCLIP assay for RP1-4G17.5 is not avaliable on ENCORE database.

Summary

Diffrential Expression

The Knockdown/knockout assay for RP1-4G17.5 is not available on ENCORE database.
No RBPs affect the gene expression of RP1-4G17.5 on ENCORE database.

RP1-4G17.5

General Information

Functions

Localization

Domains (AlphaFold: RP1-4G17.5)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for RP1-4G17.5 is not avaliable on ENCORE database.

18 proteins are bound to RP1-4G17.5 RNA:

eCLIP assay for RP1-4G17.5 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for RP1-4G17.5 is not available on ENCORE database.

No RBPs affect the gene expression of RP1-4G17.5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-4G17.5 is not available on ENCORE database.

No RBPs affect the alternative splcing events of RP1-4G17.5 on ENCORE database.

The Knockdown/knockout RNA-Seq assay for RP1-4G17.5 is not avaliable on ENCORE database.