NHSL2

General Information

Gene Name       : NHSL2
Gene ID             : ENSG00000204131.9
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NHSL2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NHSL2ENSG00000204131.90.020.050.04ENCSR000AEF
HepG2NHSL2ENSG00000204131.90.000.010.01ENCSR985KAT
K562NHSL2ENSG00000204131.90.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NHSL2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NHSL2 RNA is bound by 6 proteins.  







eCLIP assay for NHSL2 is not avaliable on ENCORE database.





6 proteins are bound to NHSL2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chrX7128440371284429+intron-Distal6.7070211.45285K562RPS11
chrX7128439771284409+intron-Distal6.06168400.00000K562RPS3
chrX7128439971284425+intron-Distal6.172139.54749K562FASTKD2
chrX7128440371284424+intron-Distal6.018435.18024K562WRN
chrX7128440071284427+intron-Distal5.447935.69694K562APOBEC3C
chrX7128441171284429+intron-Distal6.06168400.00000K562RPS3
chrX7128439871284428+intron-Distal6.6841215.10174K562GPKOW
chrX7128440271284429+intron-Distal6.9253318.39360HepG2RPS3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NHSL2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NHSL2 is not available on ENCORE database.

  • No RBPs affect the gene expression of NHSL2 on ENCORE database.


The Knockdown/knockout RNA-Seq assay for NHSL2 is not available on ENCORE database.






No RBPs affect the gene expression of NHSL2 on ENCORE database.






The Knockdown/knockout RNA-Seq assay for NHSL2 is not available on ENCORE database.






No RBPs affect the alternative splcing events of NHSL2 on ENCORE database.





The Knockdown/knockout RNA-Seq assay for NHSL2 is not avaliable on ENCORE database.