NCAM2

General Information

Gene Name : NCAM2
Gene ID : ENSG00000154654.14
Essential Gene : No

Functions

Not Available

Localization

Not Available

Domains (AlphaFold: NCAM2)

Not Available

Antibody Validation

Not Avaiable

Expression Level in Cell lines

Cell Line	Gene Name	Ensembl ID	Rep1 TPM	Rep2 TPM	Average TPM	Experiment ID
Gm12878	NCAM2	ENSG00000154654.14	0.00	0.00	0.00	ENCSR000AEF
HepG2	NCAM2	ENSG00000154654.14	0.00	0.01	0.01	ENCSR985KAT
K562	NCAM2	ENSG00000154654.14	13.93	15.25	14.59	ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.

eCLIP

No eCLIP experiment available

Antibody Validation

No Antibody Primary Validation image or Secondary image available

KD RNA-Seq

No KD RNA-Seq experiment available

RNA Bind-n-Seqn

No RBNS experiment available

Localization Image in HepG2

No Localization Information available

RBP	Antibody Info	Primary-HepG2	Secondary-HepG2	Primary-K562	Secondary-K562	Primary-UBERON	Primary-Hela

Summary
Proteins Bound to RBP RNA

RNA Targets

eCLIP assay for NCAM2 is not avaliable on ENCORE database.

Proteins bound to RNA

NCAM2 RNA is bound by 19 proteins.

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eCLIP assay for NCAM2 is not avaliable on ENCORE database.

19 proteins are bound to NCAM2 RNA:

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Search:

Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name
chr21	22861772	22861831	+	intron-Distal	5.62824	45.52887	K562	PTBP1
chr21	22861701	22861772	+	intron-Distal	5.41674	43.65300	K562	PTBP1
chr21	22550082	22550157	+	intron-Distal	5.15890	27.16868	K562	PTBP1
chr21	22524001	22524026	+	intron-Distal	5.13629	20.60799	K562	KHSRP
chr21	22523980	22524001	+	intron-Distal	4.24716	20.54406	K562	KHSRP
chr21	22523973	22523980	+	intron-Distal	4.13023	18.15244	K562	KHSRP
chr21	22550028	22550082	+	intron-Distal	5.58924	16.57054	K562	PTBP1
chr21	22588081	22588199	+	intron-Distal	5.80786	15.08356	K562	TARDBP
chr21	22728907	22728977	+	intron-Distal	6.11142	13.80520	K562	QKI
chr21	22525654	22525715	+	intron-Distal	3.52108	12.59678	K562	KHSRP
Chr	Start	End	Strand	Matched Area	log2(fold change)	-log(p-value)	Cell Line	Binding Protein Name

Showing 1 to 10 of 98 entries

eCLIP assay for NCAM2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout assay for NCAM2 is not available on ENCORE database.
98 RBPs can affect the levels of NCAM2.

CanvasJS.com

The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.

98 RBPs can affect the gene expression of NCAM2 :

Show entries

Search:

Gene Name	Gene ID	KDMean	CNMean	log2(fold change) *	-log(pval) **	-log(padj) **	Cell Line	Affected by RBP	Bound by RBP
NCAM2	ENSG00000154654.10	417.24900	1562.02550	-1.90440	50.34580	48.13300	K562	AQR
NCAM2	ENSG00000154654.10	387.89820	1323.33180	-1.77040	37.64100	34.37830	K562	FIP1L1
NCAM2	ENSG00000154654.10	451.99150	1225.48760	-1.43900	34.64560	32.18620	K562	SRSF1
NCAM2	ENSG00000154654.10	764.78210	1949.13630	-1.34970	29.79930	27.24630	K562	AKAP8L
NCAM2	ENSG00000154654.10	916.53610	1933.34430	-1.07680	20.52300	19.07490	K562	PUS1
NCAM2	ENSG00000154654.10	739.77720	1511.48390	-1.03080	19.98940	17.84950	K562	GRSF1
NCAM2	ENSG00000154654.10	992.65830	1883.47440	-0.92400	18.09720	16.54920	K562	RBM15
NCAM2	ENSG00000154654.10	610.28850	1198.95230	-0.97420	15.75410	13.56070	K562	RBM22
NCAM2	ENSG00000154654.10	1136.46840	1669.45510	-0.55480	13.98730	12.49150	K562	NSUN2
NCAM2	ENSG00000154654.10	748.63810	1250.12150	-0.73970	11.59260	10.29390	K562	PTBP1
Gene Name	Gene ID	KDMean	CNMean	log2(fold change)	-log(pval)	-log(padj)	Cell Line	Affected by RBP	Bound by RBP

Showing 1 to 10 of 98 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.

4 RBPs can affect the splicing of NCAM2 :

Show entries

Search:

Event Type	Gene Name	Gene ID	chr	Strand	ExonStart	ExonEnd	2ndExonStart	2ndExonEnd	upstreamES	upstreamEE	downstreamES	downstreamEE	dPSI	p-value	FDR	is_included	Cell Line	Affected by RBP
SE	NCAM2	ENSG00000154654.10	chr21	+	22582859	22583010			22519437	22519569	22652897	22652972	0.14400	0.00002	0.00143	included	K562	HNRNPU
MXE	NCAM2	ENSG00000154654.10	chr21	+	22582859	22583010	22626540	22626666	22519437	22519569	22652897	22652972	-0.65000	0.00004	0.00139	2included	K562	SRSF1
SE	NCAM2	ENSG00000154654.10	chr21	+	22582859	22583010			22519437	22519569	22652897	22652972	0.17800	0.00011	0.02700	included	K562	LARP4
SE	NCAM2	ENSG00000154654.10	chr21	+	22582859	22583010			22519437	22519569	22652897	22652972	-0.07700	0.00037	0.00922	excluded	K562	SRSF1
SE	NCAM2	ENSG00000154654.10	chr21	+	22582859	22583010			22519437	22519569	22652897	22652972	0.12600	0.00177	0.09607	included	K562	HNRNPL
SE	NCAM2	ENSG00000154654.10	chr21	+	22757923	22758039			22746182	22746333	22782593	22782781	0.05300	0.00206	0.06530	included	K562	HNRNPU

Showing 1 to 6 of 6 entries

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".

NCAM2

General Information

Functions

Localization

Domains (AlphaFold: NCAM2)

Antibody Validation

Expression Level in Cell lines

Assays

RNA Targets

Proteins bound to RNA

eCLIP assay for NCAM2 is not avaliable on ENCORE database.

19 proteins are bound to NCAM2 RNA:

eCLIP assay for NCAM2 is not avaliable on ENCORE database.

Diffrential Expression

The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.

98 RBPs can affect the gene expression of NCAM2 :

The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.

4 RBPs can affect the splicing of NCAM2 :

The Knockdown/knockout RNA-Seq assay for NCAM2 is not avaliable on ENCORE database.