NCAM2

General Information

Gene Name       : NCAM2
Gene ID             : ENSG00000154654.14
Essential Gene : No

Functions

Localization

Domains (AlphaFold: NCAM2)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878NCAM2ENSG00000154654.140.000.000.00ENCSR000AEF
HepG2NCAM2ENSG00000154654.140.000.010.01ENCSR985KAT
K562NCAM2ENSG00000154654.1413.9315.2514.59ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for NCAM2 is not avaliable on ENCORE database.



Proteins bound to RNA
  • NCAM2 RNA is bound by 19 proteins.  







eCLIP assay for NCAM2 is not avaliable on ENCORE database.





19 proteins are bound to NCAM2 RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr212280446122804531+CDS3.322814.08171K562YBX3
chr212284965622849784+CDS4.0942610.92483K562UCHL5
chr212270795322707988+CDS,intron-Proximal4.241324.07072K562UCHL5
chr212266455422664671+CDS,intron-Distal,intron-Proximal3.193514.10408K562KHSRP
chr212274622922746325+CDS3.485844.89070K562UCHL5
chr212266445922664565+CDS,intron-Proximal3.318786.02234K562UCHL5
chr212280453122804596+CDS3.138083.68829K562YBX3
chr212284973822849844+CDS,intron-Proximal3.013723.94281K562PRPF8
chr212274624322746312+CDS3.425475.53307K562ZNF622
chr212284966322849738+CDS3.766927.65528K562ZNF622
chr212261991522620064+intron-Distal3.702915.20123K562KHSRP
chr212252425922524289+intron-Distal4.636746.09994K562KHSRP
chr212262788722627982+intron-Distal5.198366.85401K562QKI
chr212252411522524166+intron-Distal3.6452811.77432K562KHSRP
chr212253483722534953+intron-Distal3.370194.12241K562SAFB2
chr212252416622524178+intron-Distal3.472896.80241K562KHSRP
chr212255235422552439+intron-Distal4.974659.92017K562XRCC6
chr212254121422541276+intron-Distal3.653643.01412K562SAFB2
chr212261227522612368+intron-Distal4.356087.59321K562PTBP1
chr212258037422580462+intron-Distal3.802953.08967K562KHDRBS1
chr212286324222863286+intron-Distal3.386404.08064K562KHSRP
chr212264524622645312+intron-Distal4.123663.42885K562AGGF1
chr212255002822550082+intron-Distal5.5892416.57054K562PTBP1
chr212257901222579089+intron-Distal3.140953.11628K562KHSRP
chr212255032622550392+intron-Distal3.039018.10993K562KHSRP
chr212285685122856937+intron-Distal4.4843210.71730K562KHSRP
chr212252565422525715+intron-Distal3.5210812.59678K562KHSRP
chr212254039422540544+intron-Distal3.458754.84808K562HNRNPL
chr212258333322583399+intron-Distal3.784026.46071K562HNRNPL
chr212252767122527710+intron-Distal4.879117.69142K562KHSRP
chr212255400222554127+intron-Distal4.3553810.19865K562PTBP1
chr212252258122522597+intron-Distal5.2162610.05887K562KHSRP
chr212252390722523949+intron-Distal3.8052610.91999K562KHSRP
chr212259726222597359+intron-Distal3.991833.86679K562SAFB2
chr212253779322537859+intron-Distal3.970634.04407K562HNRNPL
chr212252475622524783+intron-Distal3.077096.00234K562KHSRP
chr212258808122588199+intron-Distal5.8078615.08356K562TARDBP
chr212259980722599908+intron-Distal4.341955.09407K562KHDRBS1
chr212272890722728977+intron-Distal6.1114213.80520K562QKI
chr212252478322524833+intron-Distal3.8226510.58053K562KHSRP
chr212275765122757803+intron-Distal4.348607.75636K562HNRNPL
chr212252771022527751+intron-Distal3.827806.89441K562KHSRP
chr212260156522601625+intron-Distal3.070523.11628K562KHSRP
chr212257217522572287+intron-Distal3.905885.50753K562QKI
chr212255009122550178+intron-Distal3.707249.56350K562ILF3
chr212252571522525770+intron-Distal3.6592912.33072K562KHSRP
chr212254872622548847+intron-Distal5.059606.23225K562QKI
chr212252304422523110+intron-Distal3.8011912.53363K562KHSRP
chr212253973422539790+intron-Distal4.021654.43126K562KHDRBS1
chr212252369122523755+intron-Distal4.1523111.77769K562KHSRP
chr212262019522620271+intron-Distal3.098343.25203K562PTBP1
chr212253499522535083+intron-Distal4.387695.19234K562LIN28B
chr212253388922533945+intron-Distal3.307864.16402K562TARDBP
chr212286316322863236+intron-Distal3.614094.98593K562KHSRP
chr212275262022752761+intron-Distal3.954684.10688K562KHSRP
chr212285666222856739+intron-Distal3.837063.02097K562U2AF1
chr212285389622854014+intron-Distal3.205544.12241K562SAFB2
chr212257315922573249+intron-Distal3.502116.62338K562TARDBP
chr212257052722570591+intron-Distal4.294274.92524K562TARDBP
chr212259483722594914+intron-Distal4.283704.51328K562SAFB2
chr212286170122861772+intron-Distal5.4167443.65300K562PTBP1
chr212271114022711214+intron-Distal4.090074.54401K562KHSRP
chr212262511322625174+intron-Distal4.439643.42734K562PTBP1
chr212286177222861831+intron-Distal5.6282445.52887K562PTBP1
chr212262534422625386+intron-Distal5.362388.11407K562PTBP1
chr212252397322523980+intron-Distal4.1302318.15244K562KHSRP
chr212257960922579682+intron-Distal3.374363.73266K562KHSRP
chr212286170022861832+intron-Distal4.2480811.53871K562TIA1
chr212252398022524001+intron-Distal4.2471620.54406K562KHSRP
chr212252792822527960+intron-Distal4.189044.79477K562KHSRP
chr212285741822857506+intron-Distal3.344918.90469K562KHSRP
chr212252394922523973+intron-Distal3.142777.33493K562KHSRP
chr212253980722539844+intron-Distal3.717993.08967K562KHDRBS1
chr212253937722539433+intron-Distal3.090073.68839K562KHSRP
chr212252259722522632+intron-Distal4.5102711.58574K562KHSRP
chr212252429322524320+intron-Distal4.4419712.23779K562KHSRP
chr212259042922590535+intron-Distal5.152259.31813K562CSTF2T
chr212255008222550157+intron-Distal5.1589027.16868K562PTBP1
chr212259184322591901+intron-Distal4.346164.96063K562LIN28B
chr212251988022519923+intron-Distal4.986187.91896K562HNRNPL
chr212251983022519875+intron-Distal3.8638311.02902K562HNRNPL
chr212252432022524344+intron-Distal3.450367.84449K562KHSRP
chr212263067022630831+intron-Distal4.764848.17174K562SAFB2
chr212262722722627289+intron-Distal4.043674.13603K562TARDBP
chr212259524022595304+intron-Distal3.168043.67498K562SAFB2
chr212263056722630670+intron-Distal4.319245.37891K562SAFB2
chr212259088022591000+intron-Distal3.033663.34630K562SAFB2
chr212252362022523669+intron-Distal4.910717.69142K562KHSRP
chr212285659722856633+intron-Distal3.065883.51696K562KHSRP
chr212256161622561686+intron-Distal3.720403.49896K562KHDRBS1
chr212252787222527928+intron-Distal3.402697.29915K562KHSRP
chr212259971022599807+intron-Distal3.463915.25672K562KHDRBS1
chr212255163622551702+intron-Distal3.182843.31830K562KHSRP
chr212277399122774114+intron-Distal3.909883.06150K562KHSRP
chr212252400122524026+intron-Distal5.1362920.60799K562KHSRP
chr212281636222816439+intron-Distal3.775054.31658K562EXOSC5
chr212286110522861161+intron-Distal3.363004.76004K562KHSRP
chr212264537122645397+intron-Distal4.436633.86413K562AGGF1
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for NCAM2 is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for NCAM2 is not available on ENCORE database.

  • 98 RBPs can affect the levels of NCAM2.  








The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.





98 RBPs can affect the gene expression of NCAM2 :

Gene NameGene IDKDMeanCNMeanlog2(fold change) *-log(pval) **-log(padj) **Cell LineAffected by RBPBound by RBP
NCAM2ENSG00000154654.109.816100.0000099999.999902.269001.78230HepG2AKAP1
NCAM2ENSG00000154654.101402.311701841.08820-0.392803.558702.15390K562ABCF1
NCAM2ENSG00000154654.101154.737201873.23240-0.6980010.922109.88800K562AGGF1
NCAM2ENSG00000154654.101272.771602058.20840-0.6934010.829308.54840K562AKAP8
NCAM2ENSG00000154654.10764.782101949.13630-1.3497029.7993027.24630K562AKAP8L
NCAM2ENSG00000154654.101748.449902167.62120-0.310002.740201.50550K562APOBEC3C
NCAM2ENSG00000154654.10417.249001562.02550-1.9044050.3458048.13300K562AQR
NCAM2ENSG00000154654.101354.327302045.02440-0.594509.332207.52940K562ATP5C1
NCAM2ENSG00000154654.10772.710001013.14690-0.390804.040502.40080K562BCCIP
NCAM2ENSG00000154654.10669.87320979.03700-0.547507.719606.08800K562BCLAF1
NCAM2ENSG00000154654.10691.481801236.35320-0.838305.728804.46140K562BOP1
NCAM2ENSG00000154654.10917.933801282.32980-0.482303.871102.13430K562BUD13
NCAM2ENSG00000154654.101600.295402238.76810-0.484407.361305.43090K562CCDC124
NCAM2ENSG00000154654.101088.666301776.16420-0.706203.932902.16340K562CKAP4
NCAM2ENSG00000154654.101175.343302403.52940-1.032109.249107.27470K562CNOT7
NCAM2ENSG00000154654.101703.537902182.78020-0.357604.280902.88440K562CPEB4
NCAM2ENSG00000154654.10770.543801314.64410-0.770708.161906.80080K562CPSF6
NCAM2ENSG00000154654.10490.58640742.74540-0.598406.040804.39690K562CSTF2
NCAM2ENSG00000154654.102113.597103020.65960-0.515208.745107.04970K562CELF1
NCAM2ENSG00000154654.101637.013802197.81070-0.425004.416202.54280K562DDX19B
NCAM2ENSG00000154654.10809.630701100.23460-0.442505.337303.61430K562DDX21
NCAM2ENSG00000154654.10634.57280789.80370-0.315702.249201.31730K562DDX3X
NCAM2ENSG00000154654.101858.993902258.30420-0.280702.426201.81060K562DDX47
NCAM2ENSG00000154654.10595.89290800.73910-0.426304.255202.52600K562DDX6
NCAM2ENSG00000154654.101395.473302097.70470-0.588109.553207.72140K562DKC1
NCAM2ENSG00000154654.10550.63420886.76290-0.687502.577601.34600K562EEF2
NCAM2ENSG00000154654.10464.88870856.94050-0.882304.572303.38380K562EFTUD2
NCAM2ENSG00000154654.10635.86600867.45670-0.448105.231303.54660K562EIF2S1
NCAM2ENSG00000154654.10571.09240743.04070-0.379703.389302.08750K562EIF4B
NCAM2ENSG00000154654.101919.329702456.57720-0.356005.387604.09790K562EIF4G2
NCAM2ENSG00000154654.10625.83560843.33630-0.430303.740602.23360K562EXOSC5
NCAM2ENSG00000154654.10387.898201323.33180-1.7704037.6410034.37830K562FIP1L1
NCAM2ENSG00000154654.10891.584501337.53030-0.585106.246104.94560K562FMR1
NCAM2ENSG00000154654.10856.357801133.63890-0.404702.844101.91730K562FTO
NCAM2ENSG00000154654.10617.29070858.08750-0.475205.286204.48710K562FXR1
NCAM2ENSG00000154654.101204.23090942.731700.353101.905801.33180K562G3BP2
NCAM2ENSG00000154654.101031.638601429.12860-0.470206.368804.67610K562GLRX3
NCAM2ENSG00000154654.10698.960401255.19830-0.8446010.042008.51700K562GPKOW
NCAM2ENSG00000154654.10739.777201511.48390-1.0308019.9894017.84950K562GRSF1
NCAM2ENSG00000154654.10848.472601216.33790-0.519604.179002.86100K562HNRNPA1
NCAM2ENSG00000154654.10665.550401135.82670-0.7711010.647709.53940K562HNRNPC
NCAM2ENSG00000154654.10785.704301014.16230-0.368202.732001.59590K562HNRNPF
NCAM2ENSG00000154654.10664.138901346.87700-1.0201011.307509.53390K562HNRNPU
NCAM2ENSG00000154654.10889.192501223.94210-0.461003.066501.96640K562IGF2BP2
NCAM2ENSG00000154654.101234.647902068.68530-0.744609.915908.08830K562KIF1C
NCAM2ENSG00000154654.10620.422701071.68650-0.788606.591705.08030K562KRR1
NCAM2ENSG00000154654.10808.050001099.50770-0.444303.932102.22340K562LARP7
NCAM2ENSG00000154654.10861.881801151.70540-0.418202.927701.42900K562LIN28B
NCAM2ENSG00000154654.101276.067001980.10740-0.633904.678803.17210K562MAK16
NCAM2ENSG00000154654.10864.535001284.20030-0.570907.237105.65250K562MATR3
NCAM2ENSG00000154654.101706.732802317.42710-0.441305.921604.49580K562MBNL1
NCAM2ENSG00000154654.10692.487901225.19810-0.8232011.231209.38810K562METAP2
NCAM2ENSG00000154654.101818.204402618.44830-0.526206.264304.58040K562MSI2
NCAM2ENSG00000154654.101048.720001502.54330-0.518809.214507.82560K562MTPAP
NCAM2ENSG00000154654.10953.437901624.33410-0.768607.322305.62670K562NAA15
NCAM2ENSG00000154654.10653.16290823.97190-0.335202.557701.37610K562NCBP2
NCAM2ENSG00000154654.101920.478002687.12540-0.484605.709703.52580K562NOL12
NCAM2ENSG00000154654.10585.00570843.73230-0.528302.595601.35770K562NONO
NCAM2ENSG00000154654.101136.468401669.45510-0.5548013.9873012.49150K562NSUN2
NCAM2ENSG00000154654.10809.244601118.12650-0.466403.506201.82980K562NUSAP1
NCAM2ENSG00000154654.10997.181201558.41710-0.644202.870601.85650K562PABPN1
NCAM2ENSG00000154654.10897.620601144.96320-0.351102.689101.72460K562PCBP2
NCAM2ENSG00000154654.10723.896101072.72230-0.567404.818703.72420K562PCBP3
NCAM2ENSG00000154654.10753.190801108.81770-0.557905.193703.15930K562PHF6
NCAM2ENSG00000154654.102025.078402524.21500-0.317903.762402.09420K562PNPT1
NCAM2ENSG00000154654.10575.33430822.83440-0.516205.054903.96920K562POLR2G
NCAM2ENSG00000154654.101034.848601502.16040-0.537605.797104.53620K562PPIG
NCAM2ENSG00000154654.10447.84640833.89520-0.896904.837503.84850K562PRPF8
NCAM2ENSG00000154654.10662.682601018.35080-0.619806.637005.13670K562PSIP1
NCAM2ENSG00000154654.10748.638101250.12150-0.7397011.5926010.29390K562PTBP1
NCAM2ENSG00000154654.101993.487802680.29610-0.427104.848803.77200K562PUF60
NCAM2ENSG00000154654.102162.210102851.02200-0.399005.527303.97720K562PUM1
NCAM2ENSG00000154654.102300.495102793.32830-0.280003.503302.42280K562PUM2
NCAM2ENSG00000154654.10916.536101933.34430-1.0768020.5230019.07490K562PUS1
NCAM2ENSG00000154654.10992.658301883.47440-0.9240018.0972016.54920K562RBM15
NCAM2ENSG00000154654.10610.288501198.95230-0.9742015.7541013.56070K562RBM22
NCAM2ENSG00000154654.10960.78540746.137400.364702.322101.41470K562RPS3
NCAM2ENSG00000154654.10555.39850733.10320-0.400502.856901.75700K562SAFB
NCAM2ENSG00000154654.101234.930401647.33430-0.415705.890804.73540K562SF3A3
NCAM2ENSG00000154654.10706.006801193.60430-0.757603.164702.12290K562SF3B1
NCAM2ENSG00000154654.10735.763401738.29980-1.240408.186005.53450K562SFPQ
NCAM2ENSG00000154654.101050.85610801.711100.390302.970101.32580K562SND1
NCAM2ENSG00000154654.10604.59380880.62460-0.542604.763103.30980K562SRFBP1
NCAM2ENSG00000154654.10451.991501225.48760-1.4390034.6456032.18620K562SRSF1
NCAM2ENSG00000154654.10829.437401157.26110-0.480504.470203.08160K562SRSF5
NCAM2ENSG00000154654.10701.09090981.89670-0.486006.212104.44670K562SRSF7
NCAM2ENSG00000154654.101862.732202338.57750-0.328203.584601.86790K562SUCLG1
NCAM2ENSG00000154654.10782.200201240.37740-0.665207.480706.25240K562TARDBP
NCAM2ENSG00000154654.10912.311701196.45680-0.391203.689602.72650K562TIA1
NCAM2ENSG00000154654.10625.31560979.50470-0.647505.892404.47450K562TIAL1
NCAM2ENSG00000154654.10836.069801173.83360-0.489504.509803.05330K562TRA2A
NCAM2ENSG00000154654.10633.999301040.39910-0.714607.767305.99600K562TRIM56
NCAM2ENSG00000154654.101290.420501529.40470-0.245102.513801.31000K562TROVE2
NCAM2ENSG00000154654.101127.231901959.86980-0.798005.289303.31810K562UTP18
NCAM2ENSG00000154654.10999.396801514.66850-0.599908.262206.70790K562WDR3
NCAM2ENSG00000154654.101362.222301575.08440-0.209502.231301.46460K562WDR43
NCAM2ENSG00000154654.101379.032301850.81590-0.424504.600202.92740K562WRN
NCAM2ENSG00000154654.101138.364301759.62270-0.628308.494306.85770K562ZC3H8
Gene NameGene IDKDMeanCNMeanlog2(fold change)-log(pval)-log(padj)Cell LineAffected by RBPBound by RBP

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".






The Knockdown/knockout RNA-Seq assay for NCAM2 is not available on ENCORE database.





4 RBPs can affect the splicing of NCAM2 :

Event TypeGene NameGene IDchrStrandExonStartExonEnd2ndExonStart2ndExonEndupstreamESupstreamEEdownstreamESdownstreamEEdPSIp-valueFDRis_includedCell LineAffected by RBPBound by RBP
SENCAM2ENSG00000154654.10chr21+225828592258301022519437225195692265289722652972-0.077000.000370.00922excludedK562SRSF1
SENCAM2ENSG00000154654.10chr21+2258285922583010225194372251956922652897226529720.178000.000110.02700includedK562LARP4
SENCAM2ENSG00000154654.10chr21+2258285922583010225194372251956922652897226529720.126000.001770.09607includedK562HNRNPL
SENCAM2ENSG00000154654.10chr21+2258285922583010225194372251956922652897226529720.144000.000020.00143includedK562HNRNPU
SENCAM2ENSG00000154654.10chr21+2275792322758039227461822274633322782593227827810.053000.002060.06530includedK562HNRNPU
MXENCAM2ENSG00000154654.10chr21+2258285922583010226265402262666622519437225195692265289722652972-0.650000.000040.001392includedK562SRSF1

*: "Inf" was shown as "99999.99999" and "-Inf" was shown as "-99999.99999".
**: "-log(0)" was displayed as "99999.99999".





The Knockdown/knockout RNA-Seq assay for NCAM2 is not avaliable on ENCORE database.