HBM

General Information

Gene Name       : HBM
Gene ID             : ENSG00000206177.6
Essential Gene : No

Functions

Localization

Domains (AlphaFold: HBM)


Antibody Validation

Expression Level in Cell lines

Cell Line Gene Name Ensembl ID Rep1 TPM Rep2 TPM Average TPM Experiment ID
Gm12878HBMENSG00000206177.60.000.000.00ENCSR000AEF
HepG2HBMENSG00000206177.60.000.000.00ENCSR985KAT
K562HBMENSG00000206177.60.000.000.00ENCSR000AEO

Assays

0 Released experiments are available on ENCORE database.







  eCLIP  

No eCLIP experiment available



  Antibody Validation  

No Antibody Primary Validation image or Secondary image available



  KD RNA-Seq  

No KD RNA-Seq experiment available



  RNA Bind-n-Seqn  

No RBNS experiment available



  Localization Image in HepG2  

No Localization Information available













RBP Antibody InfoPrimary-HepG2Secondary-HepG2Primary-K562Secondary-K562Primary-UBERONPrimary-Hela








RNA Targets

  • eCLIP assay for HBM is not avaliable on ENCORE database.



Proteins bound to RNA
  • HBM RNA is bound by 9 proteins.  







eCLIP assay for HBM is not avaliable on ENCORE database.





9 proteins are bound to HBM RNA:

Chr Start End Strand Matched Area log2(fold change) -log(p-value) Cell Line Binding Protein Name
chr16204411204420+3'-UTR,intron-Distal7.53030400.00000K562PCBP1
chr16204322204346+CDS,intron-Distal5.24134400.00000K562PCBP1
chr16204420204465+3'-UTR,intron-Distal7.58637400.00000K562PCBP1
chr16204450204489+3'-UTR,intron-Distal4.5719020.63459K562RPS3
chr16204288204371+CDS,intron-Distal4.4716736.76510K562RPS3
chr16204315204375+CDS,intron-Distal3.2665213.36022K562LARP4
chr16204389204494+3'-UTR,CDS,intron-Distal4.87239400.00000K562LARP4
chr16204445204466+3'-UTR,intron-Distal4.36861400.00000K562PABPC4
chr16204284204354+CDS,intron-Distal5.3288722.79406K562SERBP1
chr16204315204365+CDS,intron-Distal3.364429.33588K562METAP2
chr16204433204445+3'-UTR,intron-Distal3.8447666.63656K562PABPC4
chr16204446204496+3'-UTR,intron-Distal3.8491630.46064K562APOBEC3C
chr16204369204411+3'-UTR,CDS,intron-Distal7.41924400.00000K562PCBP1
chr16214954215039+intron-Distal,intron-Proximal4.158655.28701K562PRPF8
chr16204466204497+3'-UTR,intron-Distal4.77979400.00000K562PABPC4
chr16204365204451+3'-UTR,CDS,intron-Distal5.1777832.57581K562SERBP1
chr16204371204450+3'-UTR,CDS,intron-Distal3.6569645.20257K562RPS3
chr16204270204272+CDS,intron-Distal,intron-Proximal3.1690628.17186K562YBX3
ChrStartEndStrandMatched Arealog2(fold change)-log(p-value)Cell LineBinding Protein Name




eCLIP assay for HBM is not avaliable on ENCORE database.



Diffrential Expression

  • The Knockdown/knockout assay for HBM is not available on ENCORE database.

  • No RBPs affect the gene expression of HBM on ENCORE database.


The Knockdown/knockout RNA-Seq assay for HBM is not available on ENCORE database.






No RBPs affect the gene expression of HBM on ENCORE database.






The Knockdown/knockout RNA-Seq assay for HBM is not available on ENCORE database.






No RBPs affect the alternative splcing events of HBM on ENCORE database.





The Knockdown/knockout RNA-Seq assay for HBM is not avaliable on ENCORE database.